WormBase Tree Display for Gene: WBGene00006596
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WBGene00006596 | SMap | S_parent | Sequence | Y56A3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | top-3 | |||||||
Sequence_name | Y56A3A.27 | ||||||||
Molecular_name | Y56A3A.27 | ||||||||
Y56A3A.27.1 | |||||||||
CE28138 | |||||||||
Other_name | TOP3 | Accession_evidence | EMBL | AF057032 | |||||
Y56A3A | Paper_evidence | WBPaper00004118 | |||||||
CELE_Y56A3A.27 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | top-3 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | top | ||||||||
Allele (311) | |||||||||
Possibly_affected_by | WBVar02152868 | ||||||||
WBVar02153516 | |||||||||
Strain | WBStrain00051674 | ||||||||
WBStrain00051660 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Contained_in_operon | CEOP3746 | ||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00012995 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | top-3 encodes DNA topoisomerase IIIalpha. | Paper_evidence | WBPaper00004118 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 20 Jul 2006 00:00:00 | ||||||||
Automated_description | Enables DNA topoisomerase type I (single strand cut, ATP-independent) activity. Involved in DNA topological change. Located in nucleus. Human ortholog(s) of this gene implicated in autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 5. Is an ortholog of human TOP3A (DNA topoisomerase III alpha). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | EFO:MONDO:0020629 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11992) | ||||
DOID:0111524 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11992) | ||||||
Molecular_info | Corresponding_CDS | Y56A3A.27 | |||||||
Corresponding_CDS_history | Y56A3A.27:wp52 | ||||||||
Corresponding_transcript | Y56A3A.27.1 | ||||||||
Other_sequence (27) | |||||||||
Associated_feature | WBsf994542 | ||||||||
WBsf994543 | |||||||||
WBsf1016118 | |||||||||
WBsf1016119 | |||||||||
WBsf1016120 | |||||||||
WBsf1016121 | |||||||||
WBsf227619 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr983 | ||||||||
Expr1011308 | |||||||||
Expr1032729 | |||||||||
Expr1161011 | |||||||||
Expr2017459 | |||||||||
Expr2035598 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (73) | |||||||||
Interaction (66) | |||||||||
Map_info | Map | III | Position | 13.556 | Error | 0.030041 | |||
Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4180 | |||||||
4904 | |||||||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark (2) | |||||||||
Method | Gene |