WormBase Tree Display for Gene: WBGene00006461
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| WBGene00006461 | SMap | S_parent | Sequence | M01D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tag-96 | Person_evidence | WBPerson201 | |||||
| Sequence_name | M01D7.4 | ||||||||
| Molecular_name | M01D7.4a | ||||||||
| M01D7.4a.1 | |||||||||
| CE36705 | |||||||||
| M01D7.4b | |||||||||
| CE49705 | |||||||||
| M01D7.4b.1 | |||||||||
| Other_name | CELE_M01D7.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tag-96 | ||||||||
| DB_info | Database | AceView | gene | 1C323 | |||||
| WormQTL | gene | WBGene00006461 | |||||||
| WormFlux | gene | WBGene00006461 | |||||||
| NDB | locus_tag | CELE_M01D7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006461|UniProtKB=O01969 | |||||||
| family | PTHR10457 | ||||||||
| NCBI | gene | 171755 | |||||||
| RefSeq | protein | NM_058508.4 | |||||||
| NM_001306427.3 | |||||||||
| TrEMBL | UniProtAcc | X5LVA8 | |||||||
| O01969 | |||||||||
| UniProt_GCRP | UniProtAcc | O01969 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 05 Oct 2005 17:16:52 | WBPerson2970 | Event | Acquires_merge | WBGene00019707 | ||||
| Name_change | Sequence_name | M01D7.4 | |||||||
| Acquires_merge | WBGene00019707 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (171) | |||||||||
| Strain | WBStrain00003030 | ||||||||
| WBStrain00031372 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP1993 | ||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00021534 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | tag-96 encodes a galactokinase that is a member of the GHMP family of kinases and closely related to the vertebrate galactokinase 2 (GALK2) carbohydrate kinases. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 13 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable galactokinase activity. Predicted to be involved in galactose metabolic process. Predicted to be located in cytosol. Is an ortholog of human GALK2 (galactokinase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01D7.4a | |||||||
| M01D7.4b | |||||||||
| Corresponding_transcript | M01D7.4a.1 | ||||||||
| M01D7.4b.1 | |||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf643070 | ||||||||
| WBsf982770 | |||||||||
| WBsf982771 | |||||||||
| WBsf217261 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002067 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050745 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram807 | ||||||||
| Expr6400 | |||||||||
| Expr1017971 | |||||||||
| Expr1032632 | |||||||||
| Expr1154442 | |||||||||
| Expr2017293 | |||||||||
| Expr2035428 | |||||||||
| Drives_construct | WBCnstr00003530 | ||||||||
| WBCnstr00034349 | |||||||||
| Construct_product | WBCnstr00034349 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000103922 | ||||||||
| WBInteraction000104184 | |||||||||
| WBInteraction000127255 | |||||||||
| WBInteraction000135915 | |||||||||
| WBInteraction000178894 | |||||||||
| WBInteraction000188554 | |||||||||
| WBInteraction000200795 | |||||||||
| WBInteraction000203113 | |||||||||
| WBInteraction000211454 | |||||||||
| WBInteraction000214231 | |||||||||
| WBInteraction000222825 | |||||||||
| WBInteraction000223502 | |||||||||
| WBInteraction000229731 | |||||||||
| WBInteraction000237450 | |||||||||
| WBInteraction000241564 | |||||||||
| WBInteraction000263418 | |||||||||
| WBInteraction000267911 | |||||||||
| WBInteraction000280199 | |||||||||
| WBInteraction000284531 | |||||||||
| WBInteraction000305436 | |||||||||
| WBInteraction000307097 | |||||||||
| WBInteraction000310518 | |||||||||
| WBInteraction000313695 | |||||||||
| WBInteraction000322942 | |||||||||
| WBInteraction000346515 | |||||||||
| WBInteraction000366666 | |||||||||
| WBInteraction000390830 | |||||||||
| WBInteraction000414945 | |||||||||
| WBInteraction000415211 | |||||||||
| WBInteraction000420293 | |||||||||
| WBInteraction000447021 | |||||||||
| WBInteraction000451839 | |||||||||
| WBInteraction000458920 | |||||||||
| WBInteraction000463573 | |||||||||
| WBInteraction000463900 | |||||||||
| WBInteraction000464532 | |||||||||
| WBInteraction000465932 | |||||||||
| WBInteraction000466109 | |||||||||
| WBInteraction000466965 | |||||||||
| WBInteraction000467631 | |||||||||
| WBInteraction000468420 | |||||||||
| WBInteraction000469700 | |||||||||
| WBInteraction000470112 | |||||||||
| WBInteraction000471356 | |||||||||
| WBInteraction000472008 | |||||||||
| WBInteraction000472651 | |||||||||
| WBInteraction000474517 | |||||||||
| WBInteraction000474546 | |||||||||
| WBInteraction000475120 | |||||||||
| Map_info | Map | I | Position | -12.4988 | Error | 0.004641 | |||
| Positive | Positive_clone | M01D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5657 | |||||||
| 4536 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
