WormBase Tree Display for Gene: WBGene00006461

WBGene00006461 SMap: S_parent: Sequence: M01D7
  Identity: Version: 2
    Name: CGC_name: tag-96 Person_evidence: WBPerson201
      Sequence_name: M01D7.4
      Molecular_name: M01D7.4a
        M01D7.4a.1
        CE36705
        M01D7.4b
        CE49705
        M01D7.4b.1
      Other_name: CELE_M01D7.4 Accession_evidence: NDB BX284601
      Public_name: tag-96
    DB_info: Database: AceView gene 1C323
        WormQTL gene WBGene00006461
        WormFlux gene WBGene00006461
        NDB locus_tag CELE_M01D7.4
        Panther gene CAEEL|WormBase=WBGene00006461|UniProtKB=O01969
          family PTHR10457
        NCBI gene 171755
        RefSeq protein NM_058508.4
            NM_001306427.3
        TrEMBL UniProtAcc X5LVA8
            O01969
        UniProt_GCRP UniProtAcc O01969
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 05 Oct 2005 17:16:52 WBPerson2970 Event: Acquires_merge: WBGene00019707
              Name_change: Sequence_name: M01D7.4
      Acquires_merge: WBGene00019707
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tag
    Allele (171)
    Strain: WBStrain00003030
      WBStrain00031372
    RNASeq_FPKM (74)
    GO_annotation (20)
    Contained_in_operon: CEOP1993
    Ortholog (42)
    Paralog: WBGene00021534 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: tag-96 encodes a galactokinase that is a member of the GHMP family of kinases and closely related to the vertebrate galactokinase 2 (GALK2) carbohydrate kinases. Curator_confirmed: WBPerson1843
          Date_last_updated: 13 Jun 2007 00:00:00
      Automated_description: Predicted to enable galactokinase activity. Predicted to be involved in galactose metabolic process. Predicted to be located in cytosol. Is an ortholog of human GALK2 (galactokinase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M01D7.4a
      M01D7.4b
    Corresponding_transcript: M01D7.4a.1
      M01D7.4b.1
    Other_sequence (22)
    Associated_feature: WBsf643070
      WBsf982770
      WBsf982771
      WBsf217261
  Experimental_info: RNAi_result: WBRNAi00002067 Inferred_automatically: RNAi_primary
      WBRNAi00050745 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram807
      Expr6400
      Expr1017971
      Expr1032632
      Expr1154442
      Expr2017293
      Expr2035428
    Drives_construct: WBCnstr00003530
      WBCnstr00034349
    Construct_product: WBCnstr00034349
    Microarray_results (20)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_embryo_SelectivelyEnriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00041075:hcf-1(-)_skn-1(+)_upregulated
      WBPaper00044037:eat-2_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_downregulated
      WBPaper00045774:clk-1_downregulated_CoQ10_independent
      WBPaper00046509:htz-1(ok3099)_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049626:UNC-75_target
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056617:adr-1(tm668)_downregulated_L4_protein
      WBPaper00056826:SGP_biased
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00059253:sucrose_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059739:hira-1(gk835598)_upregulated_L1
      WBPaper00061340:g1A
      WBPaper00061340:g1A_g1P
      WBPaper00061340:mc2
      WBPaper00061340:pm1_pm2
      WBPaper00061527:T24C12.3-C01G10.9
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_upregulated_coelomocyte
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065841:1_2
      WBPaper00065841:12_0
      WBPaper00030985:Erwinia_carotovora_downregulated
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036286:Pattern_H
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00037695:CC_3-day
      WBPaper00038172:crh-1null_down_regulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2nc
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040963:TA200_down
      WBPaper00040963:TA300_up
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:cluster_91
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(143_min)
      [cgc5767]:expression_class_E_pi(23_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MDET
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction (49)
  Map_info: Map: I Position: -12.4988 Error: 0.004641
    Positive: Positive_clone: M01D7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5657
        4536
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene