WormBase Tree Display for Gene: WBGene00006424
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| WBGene00006424 | SMap | S_parent | Sequence | F49E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ctbp-1 | Person_evidence | WBPerson2627 | |||||
| Sequence_name | F49E10.5 | ||||||||
| Molecular_name | F49E10.5a | ||||||||
| F49E10.5a.1 | |||||||||
| CE29966 | |||||||||
| F49E10.5b | |||||||||
| CE47412 | |||||||||
| F49E10.5b.1 | |||||||||
| Other_name | tag-45 | Person_evidence | WBPerson201 | ||||||
| CELE_F49E10.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | ctbp-1 | ||||||||
| DB_info | Database | AceView | gene | XG491 | |||||
| WormQTL | gene | WBGene00006424 | |||||||
| WormFlux | gene | WBGene00006424 | |||||||
| NDB | locus_tag | CELE_F49E10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006424|UniProtKB=Q20595 | |||||||
| family | PTHR46029 | ||||||||
| NCBI | gene | 180853 | |||||||
| RefSeq | protein | NM_001270102.3 | |||||||
| NM_001270101.4 | |||||||||
| SwissProt | UniProtAcc | Q20595 | |||||||
| UniProt_GCRP | UniProtAcc | Q20595 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 05 Oct 2006 15:31:09 | WBPerson2970 | Event | Acquires_merge | WBGene00018642 | ||||
| 3 | 16 Oct 2006 14:08:57 | WBPerson2970 | Name_change | CGC_name | ctbp-1 | ||||
| Other_name | tag-45 | ||||||||
| Acquires_merge | WBGene00018642 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ctbp | ||||||||
| Allele (175) | |||||||||
| Possibly_affected_by | WBVar02157252 | ||||||||
| Strain | WBStrain00031454 | ||||||||
| WBStrain00030103 | |||||||||
| WBStrain00047496 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00007836 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description (3) | |||||||||
| Disease_info | Experimental_model | DOID:1574 | Homo sapiens | Paper_evidence | WBPaper00041098 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 21 May 2019 00:00:00 | ||||||||
| Models_disease_asserted | WBDOannot00000674 | ||||||||
| Molecular_info | Corresponding_CDS | F49E10.5a | |||||||
| F49E10.5b | |||||||||
| Corresponding_transcript | F49E10.5a.1 | ||||||||
| F49E10.5b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (20) | |||||||||
| Transcription_factor | WBTranscriptionFactor000823 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015304 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103373 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047836 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047835 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11825 | ||||||||
| Expr12091 | |||||||||
| Expr12092 | |||||||||
| Expr12541 | |||||||||
| Expr1025813 | |||||||||
| Expr1032609 | |||||||||
| Expr1151670 | |||||||||
| Expr2010565 | |||||||||
| Expr2028805 | |||||||||
| Drives_construct | WBCnstr00019349 | ||||||||
| WBCnstr00020016 | |||||||||
| WBCnstr00021742 | |||||||||
| WBCnstr00042043 | |||||||||
| WBCnstr00042044 | |||||||||
| Construct_product | WBCnstr00019349 | ||||||||
| WBCnstr00020016 | |||||||||
| WBCnstr00020017 | |||||||||
| WBCnstr00021150 | |||||||||
| WBCnstr00021742 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (71) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | X | Position | -4.16195 | Error | 0.01114 | |||
| Positive | Positive_clone | F49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (26) | |||||||||
| Remark | Killed due to lack of data | Curator_confirmed | WBPerson2970 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
