WormBase Tree Display for Gene: WBGene00006408
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| WBGene00006408 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T14G12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | tag-18 | Person_evidence | WBPerson201 | |||||
| Sequence_name | T14G12.3 | ||||||||
| Molecular_name | T14G12.3 | ||||||||
| T14G12.3.1 | |||||||||
| CE04964 | |||||||||
| Other_name | CELE_T14G12.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tag-18 | ||||||||
| DB_info | Database | AceView | gene | XE350 | |||||
| WormQTL | gene | WBGene00006408 | |||||||
| WormFlux | gene | WBGene00006408 | |||||||
| NDB | locus_tag | CELE_T14G12.3 | |||||||
| NCBI | gene | 180662 | |||||||
| RefSeq | protein | NM_076241.10 | |||||||
| TREEFAM | TREEFAM_ID | TF353342 | |||||||
| TrEMBL | UniProtAcc | Q22508 | |||||||
| UniProt_GCRP | UniProtAcc | Q22508 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (40) | |||||||||
| Strain | WBStrain00003306 | ||||||||
| WBStrain00035574 | |||||||||
| WBStrain00035577 | |||||||||
| WBStrain00035726 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00014826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ABalppappa; ABarappppa; germ line; intestine; and muscle cell based on proteomic; Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T14G12.3 | |||||||
| Corresponding_transcript | T14G12.3.1 | ||||||||
| Other_sequence (67) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018724 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053341 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035578 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram891 | ||||||||
| Expr6697 | |||||||||
| Expr1027715 | |||||||||
| Expr1032600 | |||||||||
| Expr1156927 | |||||||||
| Expr2017238 | |||||||||
| Expr2035374 | |||||||||
| Drives_construct | WBCnstr00003777 | ||||||||
| WBCnstr00034368 | |||||||||
| Construct_product | WBCnstr00034368 | ||||||||
| Antibody | WBAntibody00000164 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (228) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | X | Position | -9.6372 | Error | 0.03819 | |||
| Positive | Positive_clone | T14G12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4310 | |||||||
| 5649 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
