WormBase Tree Display for Gene: WBGene00006407
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| WBGene00006407 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
| Identity | Version | 4 | |||||||
| Name | CGC_name | lim-9 | Person_evidence | WBPerson54 | |||||
| WBPerson505 | |||||||||
| WBPerson545 | |||||||||
| Sequence_name | F25H5.1 | ||||||||
| Molecular_name (24) | |||||||||
| Other_name | tag-15 | Person_evidence | WBPerson102 | ||||||
| CELE_F25H5.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | lim-9 | ||||||||
| DB_info | Database | AceView | gene | 1J758 | |||||
| WormQTL | gene | WBGene00006407 | |||||||
| WormFlux | gene | WBGene00006407 | |||||||
| NDB | locus_tag | CELE_F25H5.1 | |||||||
| Panther | gene | CAEEL|WormBase=F25H5.1i|UniProtKB=A0A0K3AQM0 | |||||||
| family | PTHR24205 | ||||||||
| NCBI | gene | 3565712 | |||||||
| RefSeq | protein | NM_001377616.3 | |||||||
| NM_001026238.6 | |||||||||
| NM_001377617.3 | |||||||||
| NM_001026237.7 | |||||||||
| NM_001313465.3 | |||||||||
| NM_001313491.3 | |||||||||
| NM_001030057.5 | |||||||||
| NM_001313466.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF321684 | |||||||
| TrEMBL | UniProtAcc | G5EDJ5 | |||||||
| A0A0K3AQM0 | |||||||||
| Q3S1I9 | |||||||||
| A0A0K3AQP4 | |||||||||
| O17833 | |||||||||
| G5EEA4 | |||||||||
| A0A0K3ATK8 | |||||||||
| G5EF39 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AQM0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 02 Feb 2007 10:20:45 | WBPerson2970 | Name_change | CGC_name | lim-9 | ||||
| Other_name | tag-15 | ||||||||
| 3 | 10 Jun 2014 12:12:12 | WBPerson1983 | Event | Acquires_merge | WBGene00008108 | ||||
| 4 | 13 Nov 2014 15:02:41 | WBPerson4025 | Event | Acquires_merge | WBGene00008109 | ||||
| Acquires_merge | WBGene00008108 | ||||||||
| WBGene00008109 | |||||||||
| Status | Live | ||||||||
| Gene_info (9) | |||||||||
| Molecular_info | Corresponding_CDS | F25H5.1b | |||||||
| F25H5.1c | |||||||||
| F25H5.1d | |||||||||
| F25H5.1e | |||||||||
| F25H5.1f | |||||||||
| F25H5.1g | |||||||||
| F25H5.1h | |||||||||
| F25H5.1i | |||||||||
| Corresponding_CDS_history | F25H5.1a:wp136 | ||||||||
| F25H5.1a:wp275 | |||||||||
| F25H5.1b:wp136 | |||||||||
| F25H5.1b:wp246 | |||||||||
| F25H5.1c:wp246 | |||||||||
| F25H5.1d:wp246 | |||||||||
| F25H5.1f:wp183 | |||||||||
| Corresponding_transcript | F25H5.1b.1 | ||||||||
| F25H5.1c.1 | |||||||||
| F25H5.1d.1 | |||||||||
| F25H5.1e.1 | |||||||||
| F25H5.1f.1 | |||||||||
| F25H5.1g.1 | |||||||||
| F25H5.1h.1 | |||||||||
| F25H5.1i.1 | |||||||||
| Other_sequence (62) | |||||||||
| Associated_feature (44) | |||||||||
| Transcription_factor | WBTranscriptionFactor000581 | ||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr8313 | ||||||||
| Expr8316 | |||||||||
| Expr8552 | |||||||||
| Expr1025302 | |||||||||
| Expr1029193 | |||||||||
| Expr1032599 | |||||||||
| Expr1146521 | |||||||||
| Expr1149460 | |||||||||
| Expr2013155 | |||||||||
| Expr2031387 | |||||||||
| Drives_construct | WBCnstr00013257 | ||||||||
| Antibody | WBAntibody00001285 | ||||||||
| Microarray_results (81) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction (40) | |||||||||
| Map_info | Map | I | Position | 3.6557 | Error | 0.004609 | |||
| Positive | Positive_clone | F25H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||||
| Method | Gene |
