WormBase Tree Display for Gene: WBGene00006319
expand all nodes | collapse all nodes | view schema
| WBGene00006319 | SMap | S_parent | Sequence | R09G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | sup-10 | Person_evidence | WBPerson261 | |||||
| Sequence_name | R09G11.1 | ||||||||
| Molecular_name | R09G11.1 | ||||||||
| R09G11.1.1 | |||||||||
| CE12656 | |||||||||
| Other_name | CELE_R09G11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sup-10 | ||||||||
| DB_info | Database | AceView | gene | XS145 | |||||
| WormQTL | gene | WBGene00006319 | |||||||
| WormFlux | gene | WBGene00006319 | |||||||
| NDB | locus_tag | CELE_R09G11.1 | |||||||
| NCBI | gene | 181784 | |||||||
| RefSeq | protein | NM_078434.7 | |||||||
| SwissProt | UniProtAcc | Q17374 | |||||||
| UniProt_GCRP | UniProtAcc | Q17374 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sup | ||||||||
| Reference_allele | WBVar00089305 | ||||||||
| Allele (97) | |||||||||
| Legacy_information | n183 : recessive suppressor of unc-93(e1500) no phenotype alone; probably null allele. ES3 in presence of e1500 ME3. NA > 20 (n181spo n245gri etc.). Also Class 3 (neomorphic) allele n983 : uncoordinated rubber band paralysis like unc-93(e1500); suppressed by intragenic revertants unc-93 null alleles etc. | ||||||||
| See also n181, n182, n183, n184, n185, n221, n227, n237, n240, n245, n247, n249, n250, n251, n252, n253, n258, n262, n263, n265, n269, n342, n346, n513, n515, n521, n522, n617, n619, n630, n635, n661, n664, n983, n1007, n1008, n1013, n1017, n1034 | |||||||||
| [Reiner D]] Mac-d (Muscle ACtivation-Defective) | |||||||||
| [C.elegansII] n183 : recessive suppressor of unc-93(e1500) no phenotype alone; probably null allele. ES3 in presence of e1500, ME3. OA>20(lf):n181spo, n245gri, n184 (large viable deletion, also removes mlc-1, nhr-1), n185, n221, n1034 etc.Also neomorphic dominant allele n983dm(uncoordinated "rubber-band" Unc-93 paralysis muscle activation defective (flaccid, long); suppressed by intragenic revertants, unc-93 null alleles etc.). Cloned: sequence predicts 332 aa protein, possible signal sequence, TM domain. [Greenwald and Horvitz 1980, Levin & Horvitz 1993; MT] | |||||||||
| Strain | WBStrain00026759 | ||||||||
| WBStrain00026924 | |||||||||
| WBStrain00027068 | |||||||||
| WBStrain00027076 | |||||||||
| WBStrain00027102 | |||||||||
| WBStrain00027217 | |||||||||
| WBStrain00027244 | |||||||||
| WBStrain00035099 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00057775 | ||||||||
| 00057776 | |||||||||
| 00057777 | |||||||||
| 00057778 | |||||||||
| 00057779 | |||||||||
| 00057780 | |||||||||
| 00057781 | |||||||||
| 00057782 | |||||||||
| 00057783 | |||||||||
| 00057784 | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enables potassium channel regulator activity. Involved in regulation of muscle contraction and regulation of potassium ion transport. Located in plasma membrane and striated muscle dense body. Expressed in anal depressor muscle; body wall musculature; head neurons; intestinal muscle; and vulval muscle. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09G11.1 | |||||||
| Corresponding_transcript | R09G11.1.1 | ||||||||
| Other_sequence | Hbac_isotig07632 | ||||||||
| Oden_isotig22720 | |||||||||
| Associated_feature | WBsf648883 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051643 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017665 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2774 | ||||||||
| Expr2776 | |||||||||
| Expr11648 | |||||||||
| Expr1027840 | |||||||||
| Expr1155315 | |||||||||
| Expr2017124 | |||||||||
| Expr2035260 | |||||||||
| Drives_construct | WBCnstr00010943 | ||||||||
| WBCnstr00010945 | |||||||||
| WBCnstr00019302 | |||||||||
| WBCnstr00034397 | |||||||||
| Construct_product | WBCnstr00010943 | ||||||||
| WBCnstr00010945 | |||||||||
| WBCnstr00019302 | |||||||||
| WBCnstr00034397 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction | WBInteraction000000057 | ||||||||
| WBInteraction000000073 | |||||||||
| WBInteraction000000761 | |||||||||
| WBInteraction000001476 | |||||||||
| WBInteraction000001952 | |||||||||
| WBInteraction000002500 | |||||||||
| WBInteraction000002504 | |||||||||
| WBInteraction000002506 | |||||||||
| WBInteraction000002535 | |||||||||
| WBInteraction000002721 | |||||||||
| WBInteraction000005322 | |||||||||
| WBInteraction000005326 | |||||||||
| WBInteraction000005329 | |||||||||
| WBInteraction000005330 | |||||||||
| WBInteraction000005333 | |||||||||
| WBInteraction000005340 | |||||||||
| WBInteraction000028397 | |||||||||
| WBInteraction000029552 | |||||||||
| WBInteraction000031793 | |||||||||
| WBInteraction000111073 | |||||||||
| WBInteraction000126284 | |||||||||
| WBInteraction000126358 | |||||||||
| WBInteraction000126364 | |||||||||
| WBInteraction000138743 | |||||||||
| WBInteraction000170370 | |||||||||
| WBInteraction000171181 | |||||||||
| WBInteraction000177300 | |||||||||
| WBInteraction000187989 | |||||||||
| WBInteraction000191759 | |||||||||
| WBInteraction000212048 | |||||||||
| WBInteraction000213398 | |||||||||
| WBInteraction000221414 | |||||||||
| WBInteraction000222807 | |||||||||
| WBInteraction000223680 | |||||||||
| WBInteraction000239134 | |||||||||
| WBInteraction000240619 | |||||||||
| WBInteraction000249590 | |||||||||
| WBInteraction000259174 | |||||||||
| WBInteraction000301695 | |||||||||
| WBInteraction000312990 | |||||||||
| WBInteraction000332354 | |||||||||
| WBInteraction000353311 | |||||||||
| WBInteraction000353914 | |||||||||
| WBInteraction000367088 | |||||||||
| WBInteraction000369678 | |||||||||
| WBInteraction000378467 | |||||||||
| WBInteraction000380532 | |||||||||
| WBInteraction000393027 | |||||||||
| WBInteraction000398989 | |||||||||
| WBInteraction000414295 | |||||||||
| WBInteraction000425220 | |||||||||
| WBInteraction000434480 | |||||||||
| WBInteraction000436307 | |||||||||
| WBInteraction000436905 | |||||||||
| WBInteraction000444084 | |||||||||
| WBInteraction000446353 | |||||||||
| WBInteraction000504544 | |||||||||
| WBInteraction000504547 | |||||||||
| WBInteraction000519095 | |||||||||
| WBInteraction000519142 | |||||||||
| WBInteraction000521288 | |||||||||
| Map_info | Map | X | Position | 24.1667 | Error | 0.008259 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F57C11 | |||||||
| R09G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| TR#R9-2 | |||||||||
| Mapping_data | 2_point | 405 | |||||||
| 4458 | |||||||||
| Multi_point (13) | |||||||||
| Pos_neg_data (20) | |||||||||
| Landmark_gene | |||||||||
| Reference (70) | |||||||||
| Method | Gene |
