WormBase Tree Display for Gene: WBGene00006314
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WBGene00006314 | SMap | S_parent | Sequence | B0523 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | sup-5 | Person_evidence | WBPerson261 | |||||
Sequence_name | B0523.t1 | ||||||||
Molecular_name | B0523.t1 | ||||||||
Other_name | rtw-1 | ||||||||
sup-4 | |||||||||
CELE_B0523.T1 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | sup-5 | ||||||||
DB_info | Database | NDB | locus_tag | CELE_B0523.T1 | |||||
NCBI | gene | 192048 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001272 | |||||||
Gene_class | sup | ||||||||
Reference_allele | WBVar00144020 | ||||||||
Allele | WBVar00144020 | Inferred_automatically | From strain object: CB1464 | ||||||
From strain object: CB2305 | |||||||||
From strain object: CB2317 | |||||||||
From strain object: CB2318 | |||||||||
WBVar00144375 | Inferred_automatically | From strain object: CB2095 | |||||||
WBVar00144529 | |||||||||
WBVar00144370 | |||||||||
WBVar02141215 | |||||||||
WBVar01500260 | |||||||||
WBVar01499774 | |||||||||
Legacy_information | e1464sd : amber suppressor partially or completely suppresses amber alleles of more than forty different genes; slow growing cs (sterile at 15x) otherwise no phenotype alone; probably alteration in tRNATrp gene. ES3 in presence of unc-13(e450) etc. ME1. NA > 20 all identical to e1464. | ||||||||
e1877dm : dominant suppressor of unc-51(e369) does not suppress other alleles of unc-51. ES3 in presence of e369. NA2 (e1864). | |||||||||
See also e1464, e1864, e1877, e2060 | |||||||||
Strain | WBStrain00004338 | ||||||||
WBStrain00004370 | |||||||||
WBStrain00004391 | |||||||||
WBStrain00004392 | |||||||||
WBStrain00004393 | |||||||||
RNASeq_FPKM (74) | |||||||||
Structured_description | Concise_description | sup-5 encodes a tryptophan tRNA; sup-5 mutations were first identified as suppressors of a subset of null mutations that affect muscle structure and assembly; further characterization indicated that sup-5 mutations function as informational suppressors that confer allele-specific suppression of nonsense mutations in many different genes by promoting readthrough of amber (UAG) chain-terminating codons. | Paper_evidence | WBPaper00000397 | |||||
WBPaper00000768 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Nov 2005 00:00:00 | ||||||||
Automated_description | Expressed in several structures, including body wall musculature; hermaphrodite gonad; hypodermis; intestine; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | B0523.t1 | |||||||
Experimental_info | RNAi_result | WBRNAi00000524 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13220 | ||||||||
Interaction (36) | |||||||||
Map_info | Map | III | Position | -0.134112 | Error | 0.010571 | |||
Well_ordered | |||||||||
Positive | Positive_clone | B0523 | |||||||
SB13 | |||||||||
Mapping_data | 2_point | 49 | |||||||
Multi_point | 73 | ||||||||
74 | |||||||||
75 | |||||||||
83 | |||||||||
276 | |||||||||
752 | |||||||||
753 | |||||||||
2197 | |||||||||
2198 | |||||||||
4313 | |||||||||
Reference (50) | |||||||||
Remark | yk12a10.3 removed from sequence list sdm 11/00 | ||||||||
Sequence connection updated on information from [Waterston RH]. Connection changed to B0523.t1 from B0523.5. The former lies within in an intron of the latter. [krb 020614] | |||||||||
Method | Gene |