WormBase Tree Display for Gene: WBGene00006044
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| WBGene00006044 | SMap | S_parent | Sequence | T27A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ssp-16 | Person_evidence | WBPerson680 | |||||
| Sequence_name | T27A3.3 | ||||||||
| Molecular_name | T27A3.3 | ||||||||
| T27A3.3.1 | |||||||||
| CE14221 | |||||||||
| Other_name | CELE_T27A3.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ssp-16 | ||||||||
| DB_info | Database | AceView | gene | 1G679 | |||||
| WormQTL | gene | WBGene00006044 | |||||||
| WormFlux | gene | WBGene00006044 | |||||||
| NDB | locus_tag | CELE_T27A3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006044|UniProtKB=P91499 | |||||||
| family | PTHR22947 | ||||||||
| NCBI | gene | 172294 | |||||||
| RefSeq | protein | NM_059361.8 | |||||||
| SwissProt | UniProtAcc | P91499 | |||||||
| UniProt_GCRP | UniProtAcc | P91499 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ssp | ||||||||
| Allele | WBVar00335598 | ||||||||
| WBVar00335599 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar00641951 | |||||||||
| WBVar00641952 | |||||||||
| WBVar00641953 | |||||||||
| WBVar00641954 | |||||||||
| WBVar01498959 | |||||||||
| WBVar01500249 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (44) | |||||||||
| Paralog (33) | |||||||||
| Structured_description | Automated_description | Expressed in male gonad. Is predicted to encode a protein with the following domains: PapD-like superfamily; Major sperm protein (MSP) domain; Immunoglobulin-like fold; MSP (Major sperm protein) domain; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27A3.3 | |||||||
| Corresponding_transcript | T27A3.3.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf217750 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00022533 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004316 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054261 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075804 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9248 | ||||||||
| Expr9249 | |||||||||
| Expr1011776 | |||||||||
| Expr1157808 | |||||||||
| Expr2016933 | |||||||||
| Expr2035080 | |||||||||
| Drives_construct | WBCnstr00034578 | ||||||||
| Construct_product | WBCnstr00034578 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (234) | |||||||||
| Interaction (255) | |||||||||
| Map_info | Map | I | Position | 0.783121 | Error | 0.003474 | |||
| Positive | Positive_clone | T27A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024421 | ||||||||
| WBPaper00031070 | |||||||||
| WBPaper00031865 | |||||||||
| WBPaper00035199 | |||||||||
| WBPaper00035324 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
