WormBase Tree Display for Gene: WBGene00006044
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WBGene00006044 | SMap | S_parent | Sequence | T27A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ssp-16 | Person_evidence | WBPerson680 | |||||
Sequence_name | T27A3.3 | ||||||||
Molecular_name | T27A3.3 | ||||||||
T27A3.3.1 | |||||||||
CE14221 | |||||||||
Other_name | CELE_T27A3.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | ssp-16 | ||||||||
DB_info | Database | AceView | gene | 1G679 | |||||
WormQTL | gene | WBGene00006044 | |||||||
WormFlux | gene | WBGene00006044 | |||||||
NDB | locus_tag | CELE_T27A3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006044|UniProtKB=P91499 | |||||||
family | PTHR22947 | ||||||||
NCBI | gene | 172294 | |||||||
RefSeq | protein | NM_059361.8 | |||||||
SwissProt | UniProtAcc | P91499 | |||||||
UniProt_GCRP | UniProtAcc | P91499 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ssp | ||||||||
Allele | WBVar00335598 | ||||||||
WBVar00335599 | |||||||||
WBVar01499786 | |||||||||
WBVar01499054 | |||||||||
WBVar00641951 | |||||||||
WBVar00641952 | |||||||||
WBVar00641953 | |||||||||
WBVar00641954 | |||||||||
WBVar01498959 | |||||||||
WBVar01500249 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (44) | |||||||||
Paralog (33) | |||||||||
Structured_description | Automated_description | Expressed in male gonad. Is predicted to encode a protein with the following domains: PapD-like superfamily; Major sperm protein (MSP) domain; Immunoglobulin-like fold; MSP (Major sperm protein) domain; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00022533 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004316 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054261 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075804 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9248 | ||||||||
Expr9249 | |||||||||
Expr1011776 | |||||||||
Expr1157808 | |||||||||
Expr2016933 | |||||||||
Expr2035080 | |||||||||
Drives_construct | WBCnstr00034578 | ||||||||
Construct_product | WBCnstr00034578 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (234) | |||||||||
Interaction (255) | |||||||||
Map_info | Map | I | Position | 0.783121 | Error | 0.003474 | |||
Positive | Positive_clone | T27A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024421 | ||||||||
WBPaper00031070 | |||||||||
WBPaper00031865 | |||||||||
WBPaper00035199 | |||||||||
WBPaper00035324 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |