WormBase Tree Display for Gene: WBGene00005421
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WBGene00005421 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | srh-211 | Person_evidence | WBPerson522 | |||||
Sequence_name | D1065.5 | ||||||||
Molecular_name | D1065.5a | ||||||||
D1065.5a.1 | |||||||||
CE09055 | |||||||||
D1065.5b | |||||||||
CE51554 | |||||||||
D1065.5b.1 | |||||||||
Other_name | CELE_D1065.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | srh-211 | ||||||||
DB_info | Database | AceView | gene | 5E552 | |||||
WormQTL | gene | WBGene00005421 | |||||||
WormFlux | gene | WBGene00005421 | |||||||
NDB | locus_tag | CELE_D1065.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005421|UniProtKB=O16197 | |||||||
family | PTHR22941 | ||||||||
NCBI | gene | 183922 | |||||||
RefSeq | protein | NM_071736.2 | |||||||
NM_001330827.1 | |||||||||
TrEMBL | UniProtAcc | A0A163VU50 | |||||||
O16197 | |||||||||
UniProt_GCRP | UniProtAcc | O16197 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srh | ||||||||
Allele (71) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00002258 | ||||||||
Ortholog (28) | |||||||||
Paralog (297) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in PHA and amphid neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D1065.5a | |||||||
D1065.5b | |||||||||
Corresponding_transcript | D1065.5a.1 | ||||||||
D1065.5b.1 | |||||||||
Other_sequence | Name_isotig02107 | ||||||||
Associated_feature | WBsf233554 | ||||||||
Experimental_info | RNAi_result | WBRNAi00046738 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030354 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043402 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr14081 | ||||||||
Expr1018133 | |||||||||
Expr1147388 | |||||||||
Expr2016427 | |||||||||
Expr2034635 | |||||||||
Drives_construct | WBCnstr00034984 | ||||||||
Construct_product | WBCnstr00034984 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (78) | |||||||||
Map_info | Map | V | Position | -6.59994 | Error | 0.027363 | |||
Positive | Positive_clone | D1065 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |