WormBase Tree Display for Gene: WBGene00005358
expand all nodes | collapse all nodes | view schema
| WBGene00005358 | SMap | S_parent | Sequence | T08G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-141 | Person_evidence | WBPerson522 | |||||
| Sequence_name | T08G3.5 | ||||||||
| Molecular_name | T08G3.5 | ||||||||
| T08G3.5.1 | |||||||||
| CE18937 | |||||||||
| Other_name | CELE_T08G3.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-141 | ||||||||
| DB_info | Database | AceView | gene | 5Q925 | |||||
| WormQTL | gene | WBGene00005358 | |||||||
| WormFlux | gene | WBGene00005358 | |||||||
| NDB | locus_tag | CELE_T08G3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005358|UniProtKB=Q9XU52 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 188296 | |||||||
| RefSeq | protein | NM_074758.1 | |||||||
| TrEMBL | UniProtAcc | Q9XU52 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XU52 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (93) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101493 | ||||||||
| Ortholog (53) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08G3.5 | |||||||
| Corresponding_transcript | T08G3.5.1 | ||||||||
| Other_sequence | JI466717.1 | ||||||||
| Associated_feature | WBsf1002451 | ||||||||
| WBsf1002452 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018461 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052892 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011783 | ||||||||
| Expr1156491 | |||||||||
| Expr2016385 | |||||||||
| Expr2034602 | |||||||||
| Drives_construct | WBCnstr00035016 | ||||||||
| Construct_product | WBCnstr00035016 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster | WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | ||||||||
| WBPaper00058691:cfp-1(tm6369)_upregulated | |||||||||
| WBPaper00058691:sin-3(tm1276)_upregulated | |||||||||
| WBPaper00061340:mc1 | |||||||||
| WBPaper00061340:Pharyngeal_intestinal_valve | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| WBPaper00026929:Resveratrol_regulated_daf-16 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| [cgc5767]:expression_class_M | |||||||||
| [cgc5767]:expression_class_SM | |||||||||
| Interaction (103) | |||||||||
| Map_info | Map | V | Position | 10.0813 | Error | 0.002642 | |||
| Positive | Positive_clone | T08G3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
