WormBase Tree Display for Gene: WBGene00005321
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| WBGene00005321 | SMap | S_parent | Sequence | F40D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-102 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F40D4.11 | ||||||||
| Molecular_name | F40D4.11 | ||||||||
| F40D4.11.1 | |||||||||
| CE33084 | |||||||||
| Other_name | CELE_F40D4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-102 | ||||||||
| DB_info | Database | AceView | gene | 5R638 | |||||
| WormQTL | gene | WBGene00005321 | |||||||
| WormFlux | gene | WBGene00005321 | |||||||
| NDB | locus_tag | CELE_F40D4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005321|UniProtKB=Q9XV25 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 185529 | |||||||
| RefSeq | protein | NM_074940.2 | |||||||
| TrEMBL | UniProtAcc | Q9XV25 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XV25 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (143) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102230 | ||||||||
| Ortholog (50) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40D4.11 | |||||||
| Corresponding_CDS_history | F40D4.11:wp93 | ||||||||
| Corresponding_transcript | F40D4.11.1 | ||||||||
| Associated_feature | WBsf669816 | ||||||||
| WBsf1002614 | |||||||||
| WBsf1021239 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046826 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1027991 | ||||||||
| Expr1150697 | |||||||||
| Expr2016359 | |||||||||
| Drives_construct | WBCnstr00035041 | ||||||||
| Construct_product | WBCnstr00035041 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster | WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray | ||||||||
| WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray | |||||||||
| WBPaper00040560:hpl-2_embryo_downregulated | |||||||||
| WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | |||||||||
| WBPaper00053888:drh-3(rrr2)_downregulated | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| WBPaper00062520:qui-1(db104)_upregulated | |||||||||
| Interaction | WBInteraction000446354 | ||||||||
| Map_info | Map | V | Position | 12.8062 | Error | 0.001224 | |||
| Positive | Positive_clone | F40D4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026594 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
