WormBase Tree Display for Gene: WBGene00005037
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WBGene00005037 | Evidence | Person_evidence | WBPerson522 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F44F4 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sra | ||||||
Allele (28) | |||||||
Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-11:GFP expressed in interneurons AIY,AVB, one pharyngeal neuron. sra-10,11,12 clustered. [Troemel et al. 1995; CX] | ||||||
Strain | WBStrain00031529 | ||||||
WBStrain00031694 | |||||||
WBStrain00031695 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (40) | |||||||
Paralog (34) | |||||||
Structured_description | Concise_description | sra-11 encodes an orphan, G protein-coupled seven-transmembrane receptor; SRA-11 is expressed in three classes of interneurons, AIA, AIY, and AVB throughout larval and adult stages, and analysis of sra-11 mutations indicates that sra-11 activity in AIY is essential for olfactory imprinting; sra-11 expression in AIY is positively regulated by the TTX-3 and CEH-23 homeodomain proteins, with TTX-3 required for both initiation and maintenance of expression and CEH-23 required solely for maintenance. | Paper_evidence | WBPaper00002314 | |||
WBPaper00002876 | |||||||
WBPaper00004727 | |||||||
WBPaper00026662 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 06 Jan 2006 00:00:00 | ||||||
Automated_description | Predicted to enable olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception and olfactory learning. Predicted to be located in membrane. Expressed in VC neuron; interneuron; pharyngeal neurons; and ventral ganglion. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F44F4.13 | |||||
Corresponding_CDS_history | F44F4.13:wp95 | ||||||
Corresponding_transcript | F44F4.13.1 | ||||||
Associated_feature | WBsf989521 | ||||||
WBsf1013113 | |||||||
WBsf1013114 | |||||||
WBsf223858 | |||||||
Experimental_info | RNAi_result | WBRNAi00047320 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032258 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014954 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (15) | |||||||
Drives_construct (11) | |||||||
Construct_product | WBCnstr00006609 | ||||||
WBCnstr00006610 | |||||||
WBCnstr00006611 | |||||||
WBCnstr00011034 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (51) | |||||||
Interaction (62) | |||||||
Map_info | Map | II | Position | 3.13287 | Error | 0.000161 | |
Positive | Positive_clone | F44F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4358 | |||||
4541 | |||||||
4695 | |||||||
Pseudo_map_position | |||||||
Reference (24) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |