WormBase Tree Display for Gene: WBGene00004973
expand all nodes | collapse all nodes | view schema
WBGene00004973 | SMap | S_parent | Sequence | C06E7 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | spe | ||||||
Allele (16) | |||||||
Legacy_information | [C.elegansII] it132 : ts, hermaphrodites produce nonfunctionalsperm, males are fertile. Hypomorphic allele.OA>3: some alleles probably null. Cloned: transcript only in spermatogenic germ line, encodes novel predicted protein. [BA] | ||||||
Strain (11) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00048253 | ||||||
00048254 | |||||||
00048255 | |||||||
Ortholog (15) | |||||||
Paralog | WBGene00189995 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011548 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00013573 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00044391 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00044024 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00011508 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00020983 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00015679 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | spe-27 encodes a novel, hydrophilic protein; spe-27 is required for hermaphrodite spermatogenesis or sperm activation but not for male-derived sperm activation (sperm activation is the morphogenesis of a round non-motile spermatid to an amoeboid crawling sperm); however, mutant hermaphrodite spe-27 spermatids can transactivate and form functional sperm during mating with males; genetic and phenotypic evidence suggests that spe-27 acts in a common pathway with spe-8, spe-12, spe-19 and spe-29. | Paper_evidence | WBPaper00002446 | |||
WBPaper00004444 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1843 | |||||||
WBPerson324 | |||||||
Date_last_updated | 26 Jul 2010 00:00:00 | ||||||
Automated_description | Involved in spermatid development. Expressed in sperm; spermatocyte; and in male. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C06E7.6 | |||||
Corresponding_transcript | C06E7.6.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00039916 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010324 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027822 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1561 | ||||||
Expr1562 | |||||||
Expr1023781 | |||||||
Expr1143995 | |||||||
Expr2016037 | |||||||
Expr2034271 | |||||||
Drives_construct | WBCnstr00035298 | ||||||
Construct_product | WBCnstr00035298 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (95) | |||||||
Interaction (49) | |||||||
WBProcess | WBbiopr:00000069 | ||||||
Map_info | Map | IV | Position | 2.435 | Error | 0.000957 | |
Well_ordered | |||||||
Positive | Positive_clone | C06E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
DC12 | |||||||
Mapping_data | 2_point | 7049 | |||||
7050 | |||||||
Multi_point | 4783 | ||||||
Pos_neg_data | 8919 | ||||||
8920 | |||||||
8921 | |||||||
8922 | |||||||
9076 | |||||||
Reference (44) | |||||||
Method | Gene |