WormBase Tree Display for Gene: WBGene00004915
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| WBGene00004915 | Evidence | Paper_evidence | WBPaper00005457 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | W08E3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | snr-2 | Person_evidence | WBPerson167 | |||||
| Sequence_name | W08E3.1 | ||||||||
| Molecular_name | W08E3.1 | ||||||||
| W08E3.1.1 | |||||||||
| CE14704 | |||||||||
| Other_name | CELE_W08E3.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | snr-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snr | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00035702 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP1692 | ||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00021682 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytoplasm. Predicted to be part of spliceosomal complex and spliceosomal snRNP complex. Expressed in gonad. Human ortholog(s) of this gene implicated in several diseases, including Prader-Willi syndrome; cerebrocostomandibular syndrome; and mixed connective tissue disease. Is an ortholog of human SNRPN (small nuclear ribonucleoprotein polypeptide N) and SNURF (SNRPN upstream open reading frame). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11153) | ||||
| DOID:11983 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11164) | ||||||
| DOID:0111248 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11153) | ||||||
| DOID:3492 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11153) | ||||||
| Molecular_info | Corresponding_CDS | W08E3.1 | |||||||
| Corresponding_transcript | W08E3.1.1 | ||||||||
| Other_sequence (84) | |||||||||
| Associated_feature | WBsf643797 | ||||||||
| WBsf218713 | |||||||||
| WBsf218714 | |||||||||
| WBsf218715 | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Expr2229 | ||||||||
| Expr1016560 | |||||||||
| Expr1032444 | |||||||||
| Expr1158523 | |||||||||
| Expr2015966 | |||||||||
| Expr2034201 | |||||||||
| Drives_construct | WBCnstr00035325 | ||||||||
| WBCnstr00043011 | |||||||||
| Construct_product | WBCnstr00035325 | ||||||||
| WBCnstr00043011 | |||||||||
| Antibody | WBAntibody00000549 | ||||||||
| WBAntibody00000550 | |||||||||
| WBAntibody00000551 | |||||||||
| WBAntibody00000552 | |||||||||
| WBAntibody00000553 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction (259) | |||||||||
| Map_info | Map | I | Position | 18.3808 | Error | 0.326492 | |||
| Positive | Positive_clone | W08E3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4680 | |||||||
| 5003 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
