WormBase Tree Display for Gene: WBGene00004826

WBGene00004826 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: R12H7
  Identity: Version: 1
    Name: CGC_name: skr-20 Person_evidence: WBPerson322
      Sequence_name: R12H7.5
      Molecular_name: R12H7.5
        R12H7.5.1
        CE06317
      Other_name: CELE_R12H7.5 Accession_evidence: NDB BX284606
      Public_name: skr-20
    DB_info: Database: AceView gene XN840
        WormQTL gene WBGene00004826
        WormFlux gene WBGene00004826
        NDB locus_tag CELE_R12H7.5
        Panther gene CAEEL|WormBase=WBGene00004826|UniProtKB=G5EE98
          family PTHR11165
        NCBI gene 181445
        RefSeq protein NM_077791.6
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc G5EE98
        UniProt_GCRP UniProtAcc G5EE98
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation: 00015684
      00015685
      00015686
      00015687
      00015688
      00015689
      00015690
      00113232
    Contained_in_operon: CEOPX116
    Ortholog (77)
    Paralog (20)
    Structured_description: Concise_description: The skr-20 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-20(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R12H7.5
    Corresponding_transcript: R12H7.5.1
    Other_sequence: AF440519
      CBC00224_1
    Associated_feature: WBsf671189
      WBsf238106
  Experimental_info: RNAi_result: WBRNAi00086808 Inferred_automatically: RNAi_primary
      WBRNAi00034902 Inferred_automatically: RNAi_primary
      WBRNAi00051867 Inferred_automatically: RNAi_primary
      WBRNAi00086799 Inferred_automatically: RNAi_primary
      WBRNAi00098058 Inferred_automatically: RNAi_primary
      WBRNAi00017802 Inferred_automatically: RNAi_primary
      WBRNAi00094813 Inferred_automatically: RNAi_primary
      WBRNAi00086807 Inferred_automatically: RNAi_primary
      WBRNAi00098133 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011467
      Expr1032401
      Expr1155526
      Expr2015848
      Expr2034081
    Drives_construct: WBCnstr00035360
    Construct_product: WBCnstr00035360
    Microarray_results (18)
    Expression_cluster (130)
    Interaction (13)
  Map_info: Map: X Position: 10.3998
    Positive: Positive_clone: R12H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029151
    WBPaper00029221
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene