WormBase Tree Display for Gene: WBGene00004823

WBGene00004823 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C06A8
  Identity: Version: 1
    Name: CGC_name: skr-17 Person_evidence: WBPerson322
      Sequence_name: C06A8.4
      Molecular_name: C06A8.4
        C06A8.4.1
        CE02455
        C06A8.4.2
      Other_name: CELE_C06A8.4 Accession_evidence: NDB BX284602
      Public_name: skr-17
    DB_info: Database: AceView gene 2I75
        WormQTL gene WBGene00004823
        WormFlux gene WBGene00004823
        NDB locus_tag CELE_C06A8.4
        Panther gene CAEEL|WormBase=WBGene00004823|UniProtKB=G5EGN7
          family PTHR11165
        NCBI gene 174257
        RefSeq protein NM_001393127.1
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc G5EGN7
        UniProt_GCRP UniProtAcc G5EGN7
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (21)
    Strain: WBStrain00047470
    RNASeq_FPKM (74)
    GO_annotation: 00020585
      00020586
      00020587
      00020588
      00020589
      00113229
    Ortholog (74)
    Paralog (20)
    Structured_description: Concise_description: skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs. Paper_evidence: WBPaper00004651
            WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06A8.4
    Corresponding_transcript: C06A8.4.1
      C06A8.4.2
    Other_sequence: CBC16752_1
    Associated_feature: WBsf644410
      WBsf221640
      WBsf221641
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1016910
      Expr1032398
      Expr1143917
      Expr2015844
      Expr2034077
    Drives_construct: WBCnstr00035361
    Construct_product: WBCnstr00035361
    Microarray_results (18)
    Expression_cluster (132)
    Interaction (246)
  Map_info: Map: II Position: 0.56411 Error: 0.000465
    Positive: Positive_clone: C06A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029151
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene