WormBase Tree Display for Gene: WBGene00004815
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WBGene00004815 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C52D10 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | skr | ||||||
Allele (22) | |||||||
Strain | WBStrain00033168 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00017764 | ||||||
00017765 | |||||||
00017766 | |||||||
00017767 | |||||||
00017768 | |||||||
00113222 | |||||||
Ortholog (116) | |||||||
Paralog (20) | |||||||
Structured_description | Concise_description | skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation. | Paper_evidence | WBPaper00005128 | |||
WBPaper00005129 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Expressed in intestine. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C52D10.7 | |||||
Corresponding_transcript | C52D10.7.1 | ||||||
Associated_feature | WBsf998986 | ||||||
Experimental_info | RNAi_result (23) | ||||||
Expr_pattern | Expr2443 | ||||||
Expr1022666 | |||||||
Expr1032391 | |||||||
Expr1146990 | |||||||
Expr2015856 | |||||||
Expr2034089 | |||||||
Drives_construct | WBCnstr00010834 | ||||||
WBCnstr00035368 | |||||||
Construct_product | WBCnstr00010834 | ||||||
WBCnstr00016600 | |||||||
WBCnstr00035368 | |||||||
Microarray_results (16) | |||||||
Expression_cluster (179) | |||||||
Interaction (146) | |||||||
Map_info | Map | IV | Position | 16.2315 | Error | 0.000412 | |
Positive | Positive_clone | C52D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005129 | ||||||
WBPaper00029151 | |||||||
WBPaper00033115 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |