WormBase Tree Display for Gene: WBGene00004811
expand all nodes | collapse all nodes | view schema
WBGene00004811 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F47H4 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | skr | ||||||
Allele (81) | |||||||
Strain | WBStrain00037327 | ||||||
WBStrain00032945 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00101456 | ||||||
00101457 | |||||||
00101458 | |||||||
00101459 | |||||||
00101460 | |||||||
00101461 | |||||||
00113218 | |||||||
Ortholog (60) | |||||||
Paralog (19) | |||||||
Structured_description | Concise_description | The skr-5 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-5(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||
WBPaper00005129 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable cullin family protein binding activity. Involved in determination of adult lifespan. Predicted to be located in cytoplasm and nucleus. Expressed in hypodermis; intestinal cell; and vulval muscle. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F47H4.10 | |||||
Corresponding_transcript | F47H4.10.1 | ||||||
Other_sequence | DI02100 | ||||||
Experimental_info | RNAi_result (14) | ||||||
Expr_pattern | Expr9354 | ||||||
Expr12090 | |||||||
Expr14989 | |||||||
Expr1015927 | |||||||
Expr1151537 | |||||||
Expr2015853 | |||||||
Expr2034086 | |||||||
Drives_construct | WBCnstr00008990 | ||||||
WBCnstr00013919 | |||||||
WBCnstr00020216 | |||||||
WBCnstr00035372 | |||||||
WBCnstr00041836 | |||||||
Construct_product | WBCnstr00020216 | ||||||
WBCnstr00035372 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (258) | |||||||
Interaction (25) | |||||||
Map_info | Map | V | Position | 12.8833 | Error | 0.001418 | |
Positive | Positive_clone | F47H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |