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WormBase Tree Display for CDS: F47H4.10

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Name Class

F47H4.10EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF47H4
StructureSource_exons157
109357
510641
DB_infoDatabaseTrEMBLUniProtAccQ9XU27
UniProtUniProtAccQ9XU27
UniProt_GCRPUniProtAccQ9XU27
AlphaFoldentryQ9XU27
NCBI_proteinGI_numberGI:3877338
TREEFAMTREEFAM_IDTF354233
Protein_idCHROMOSOME_VCAB072091
DB_remarkSKR-5 protein; contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (S-phase kinase-associated protein 1-like), IPR036296 (SKP1-like, dimerisation domain superfamily), IPR016072 (SKP1 component, dimerisation), IPR016897 (S-phase kinase-associated protein 1), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR016073 (SKP1 component, POZ domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004811
Corresponding_transcriptF47H4.10.1
Corresponding_proteinCE20827
Corresponding_PCR_productcenix:184-d12
mv_F47H4.10
sjj_F47H4.10
Corresponding_oligo_set (17)
Matching_cDNA (18)
RNAi_result (14)
Microarray_results (17)
Brief_identificationSkp1-related proteinAccession_evidenceUniProtTR:Q9XU27
RNASeq_FPKM (74)
Methodcurated