WormBase Tree Display for Gene: WBGene00004807

WBGene00004807 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 1
    Name: CGC_name: skr-1 Person_evidence: WBPerson322
      Sequence_name: F46A9.5
      Molecular_name: F46A9.5
        F46A9.5.1
        CE10580
      Other_name: CELE_F46A9.5 Accession_evidence: NDB BX284601
      Public_name: skr-1
    DB_info: Database: AceView gene 1K49
        WormQTL gene WBGene00004807
        WormFlux gene WBGene00004807
        NDB locus_tag CELE_F46A9.5
        Panther gene CAEEL|WormBase=WBGene00004807|UniProtKB=G5ECU1
          family PTHR11165
        NCBI gene 172775
        RefSeq protein NM_060112.8
        SwissProt UniProtAcc G5ECU1
        TREEFAM TREEFAM_ID TF354233
        UniProt_GCRP UniProtAcc G5ECU1
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (14)
    Strain: WBStrain00036440
      WBStrain00005195
    RNASeq_FPKM (74)
    GO_annotation (32)
    Ortholog (44)
    Paralog (19)
    Structured_description: Concise_description: The skr-1 gene encodes a homolog of Skp1 in S. cerevisiae that is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Involved in several processes, including negative regulation of intracellular signal transduction; regulation of cellular component organization; and regulation of protein stability. Predicted to be located in cytoplasm and nucleus. Expressed in several structures, including pharynx and spermatheca. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F46A9.5
    Corresponding_transcript: F46A9.5.1
    Other_sequence (144)
    Associated_feature: WBsf643588
      WBsf643589
      WBsf656751
      WBsf656752
      WBsf984704
      WBsf218286
      WBsf218287
      WBsf218288
      WBsf218289
  Experimental_info: RNAi_result (53)
    Expr_pattern: Expr2437
      Expr13172
      Expr1013389
      Expr1032386
      Expr1151310
      Expr2015847
      Expr2034080
    Drives_construct: WBCnstr00010827
      WBCnstr00035375
    Construct_product: WBCnstr00010827
      WBCnstr00035375
      WBCnstr00039337
    Regulate_expr_cluster: WBPaper00050332:skr-1(RNAi)-skr-2(RNAi)_downregulated
    Antibody: WBAntibody00002336
      WBAntibody00002337
    Microarray_results (24)
    Expression_cluster (98)
    Interaction: WBInteraction000009364
      WBInteraction000035590
      WBInteraction000035753
      WBInteraction000036216
      WBInteraction000036254
      WBInteraction000037947
      WBInteraction000039108
      WBInteraction000040631
      WBInteraction000041567
      WBInteraction000041568
      WBInteraction000042020
      WBInteraction000042021
      WBInteraction000042618
      WBInteraction000042992
      WBInteraction000043763
      WBInteraction000044800
      WBInteraction000045784
      WBInteraction000046019
      WBInteraction000046139
      WBInteraction000046423
      WBInteraction000046586
      WBInteraction000047573
      WBInteraction000047574
      WBInteraction000047833
      WBInteraction000049325
      WBInteraction000049709
      WBInteraction000049751
      WBInteraction000050182
      WBInteraction000050191
      WBInteraction000050798
      WBInteraction000050828
      WBInteraction000050836
      WBInteraction000103239
      WBInteraction000103427
      WBInteraction000103566
      WBInteraction000105890
      WBInteraction000106332
      WBInteraction000107079
      WBInteraction000121278
      WBInteraction000126523
      WBInteraction000130287
      WBInteraction000130288
      WBInteraction000133044
      WBInteraction000135602
      WBInteraction000135603
      WBInteraction000135605
      WBInteraction000140647
      WBInteraction000143254
      WBInteraction000144898
      WBInteraction000146251
      WBInteraction000155126
      WBInteraction000155127
      WBInteraction000155128
      WBInteraction000155129
      WBInteraction000157927
      WBInteraction000157935
      WBInteraction000158006
      WBInteraction000158530
      WBInteraction000158841
      WBInteraction000158842
      WBInteraction000158843
      WBInteraction000158844
      WBInteraction000159714
      WBInteraction000169567
      WBInteraction000169664
      WBInteraction000169665
      WBInteraction000169666
      WBInteraction000169667
      WBInteraction000169668
      WBInteraction000169669
      WBInteraction000169670
      WBInteraction000169853
      WBInteraction000169862
      WBInteraction000169884
      WBInteraction000170067
      WBInteraction000171899
      WBInteraction000173794
      WBInteraction000177670
      WBInteraction000180770
      WBInteraction000183411
      WBInteraction000185818
      WBInteraction000185863
      WBInteraction000185916
      WBInteraction000186199
      WBInteraction000189421
      WBInteraction000190562
      WBInteraction000202212
      WBInteraction000203954
      WBInteraction000206370
      WBInteraction000207255
      WBInteraction000209097
      WBInteraction000220204
      WBInteraction000226523
      WBInteraction000228810
      WBInteraction000231108
      WBInteraction000232676
      WBInteraction000233307
      WBInteraction000235462
      WBInteraction000238706
      WBInteraction000244803
      WBInteraction000262192
      WBInteraction000272719
      WBInteraction000275087
      WBInteraction000276647
      WBInteraction000280822
      WBInteraction000280976
      WBInteraction000282838
      WBInteraction000300664
      WBInteraction000302036
      WBInteraction000310490
      WBInteraction000313353
      WBInteraction000317596
      WBInteraction000317631
      WBInteraction000321321
      WBInteraction000326687
      WBInteraction000330215
      WBInteraction000333526
      WBInteraction000340873
      WBInteraction000351395
      WBInteraction000352230
      WBInteraction000358935
      WBInteraction000368516
      WBInteraction000370323
      WBInteraction000372800
      WBInteraction000376766
      WBInteraction000383173
      WBInteraction000392641
      WBInteraction000393895
      WBInteraction000401962
      WBInteraction000402929
      WBInteraction000404745
      WBInteraction000405758
      WBInteraction000417395
      WBInteraction000424513
      WBInteraction000429263
      WBInteraction000440794
      WBInteraction000440813
      WBInteraction000442923
      WBInteraction000447265
      WBInteraction000457763
      WBInteraction000462620
      WBInteraction000463936
      WBInteraction000464946
      WBInteraction000466335
      WBInteraction000467297
      WBInteraction000470672
      WBInteraction000472354
      WBInteraction000473694
      WBInteraction000500903
      WBInteraction000502855
      WBInteraction000512255
      WBInteraction000518008
      WBInteraction000520062
      WBInteraction000521748
      WBInteraction000522661
      WBInteraction000522662
      WBInteraction000523200
      WBInteraction000523400
      WBInteraction000523401
      WBInteraction000523402
      WBInteraction000523403
      WBInteraction000523404
      WBInteraction000523405
      WBInteraction000523406
      WBInteraction000523448
      WBInteraction000523637
      WBInteraction000538802
      WBInteraction000540633
      WBInteraction000540811
      WBInteraction000540816
      WBInteraction000540908
      WBInteraction000542618
      WBInteraction000542648
      WBInteraction000543613
      WBInteraction000547012
      WBInteraction000547209
      WBInteraction000547257
      WBInteraction000547376
      WBInteraction000547403
      WBInteraction000547698
      WBInteraction000548101
      WBInteraction000548102
      WBInteraction000548103
      WBInteraction000548104
      WBInteraction000548105
      WBInteraction000548106
      WBInteraction000548107
      WBInteraction000548108
      WBInteraction000548109
      WBInteraction000548955
      WBInteraction000549962
      WBInteraction000549969
      WBInteraction000549988
      WBInteraction000549999
      WBInteraction000550000
      WBInteraction000550001
      WBInteraction000550002
      WBInteraction000550003
      WBInteraction000550004
      WBInteraction000550005
      WBInteraction000550006
      WBInteraction000550007
      WBInteraction000550008
      WBInteraction000550009
      WBInteraction000550010
      WBInteraction000550011
      WBInteraction000550012
      WBInteraction000550841
      WBInteraction000551264
      WBInteraction000553047
      WBInteraction000553868
      WBInteraction000555487
      WBInteraction000556325
      WBInteraction000556344
      WBInteraction000556710
      WBInteraction000556724
      WBInteraction000557535
      WBInteraction000559287
      WBInteraction000560578
      WBInteraction000560580
      WBInteraction000566272
      WBInteraction000566551
      WBInteraction000566989
      WBInteraction000566996
      WBInteraction000567058
      WBInteraction000567098
      WBInteraction000568308
      WBInteraction000568617
      WBInteraction000568721
      WBInteraction000569133
      WBInteraction000572176
      WBInteraction000577774
      WBInteraction000579577
      WBInteraction000580391
      WBInteraction000585083
    WBProcess: WBbiopr:00000068
  Map_info: Map: I Position: 3.76789 Error: 0.000506
    Positive: Positive_clone: F46A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (31)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene