WormBase Tree Display for Gene: WBGene00004494
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| WBGene00004494 | SMap | S_parent | Sequence | K02B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rps-25 | |||||||
| Sequence_name | K02B2.5 | ||||||||
| Molecular_name | K02B2.5 | ||||||||
| K02B2.5.1 | |||||||||
| CE04691 | |||||||||
| Other_name | CELE_K02B2.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | rps-25 | ||||||||
| DB_info | Database | AceView | gene | 4G712 | |||||
| WormQTL | gene | WBGene00004494 | |||||||
| WormFlux | gene | WBGene00004494 | |||||||
| NDB | locus_tag | CELE_K02B2.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004494|UniProtKB=P52821 | |||||||
| family | PTHR12850 | ||||||||
| NCBI | gene | 177365 | |||||||
| RefSeq | protein | NM_068494.9 | |||||||
| SwissProt | UniProtAcc | P52821 | |||||||
| TREEFAM | TREEFAM_ID | TF314909 | |||||||
| UniProt_GCRP | UniProtAcc | P52821 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rps | ||||||||
| Allele (11) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps25 using blastP | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00047882 | ||||||||
| 00047883 | |||||||||
| 00047884 | |||||||||
| 00047885 | |||||||||
| Contained_in_operon | CEOP4611 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Concise_description | rps-25 encodes a small ribosomal subunit S25 protein. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is an ortholog of human RPS25 (ribosomal protein S25). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02B2.5 | |||||||
| Corresponding_transcript | K02B2.5.1 | ||||||||
| Other_sequence (64) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008945 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093770 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033338 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026420 | ||||||||
| Expr1032297 | |||||||||
| Expr1153398 | |||||||||
| Expr2015520 | |||||||||
| Expr2033755 | |||||||||
| Drives_construct | WBCnstr00035443 | ||||||||
| Construct_product | WBCnstr00035443 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (210) | |||||||||
| Map_info | Map | IV | Position | 2.76481 | |||||
| Positive | Positive_clone | K02B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005654 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
