WormBase Tree Display for Gene: WBGene00004494
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WBGene00004494 | SMap | S_parent | Sequence | K02B2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | rps-25 | |||||||
Sequence_name | K02B2.5 | ||||||||
Molecular_name | K02B2.5 | ||||||||
K02B2.5.1 | |||||||||
CE04691 | |||||||||
Other_name | CELE_K02B2.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | rps-25 | ||||||||
DB_info | Database | AceView | gene | 4G712 | |||||
WormQTL | gene | WBGene00004494 | |||||||
WormFlux | gene | WBGene00004494 | |||||||
NDB | locus_tag | CELE_K02B2.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004494|UniProtKB=P52821 | |||||||
family | PTHR12850 | ||||||||
NCBI | gene | 177365 | |||||||
RefSeq | protein | NM_068494.9 | |||||||
SwissProt | UniProtAcc | P52821 | |||||||
TREEFAM | TREEFAM_ID | TF314909 | |||||||
UniProt_GCRP | UniProtAcc | P52821 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rps | ||||||||
Allele (11) | |||||||||
Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps25 using blastP | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00047882 | ||||||||
00047883 | |||||||||
00047884 | |||||||||
00047885 | |||||||||
Contained_in_operon | CEOP4611 | ||||||||
Ortholog (41) | |||||||||
Structured_description | Concise_description | rps-25 encodes a small ribosomal subunit S25 protein. | Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is an ortholog of human RPS25 (ribosomal protein S25). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K02B2.5 | |||||||
Corresponding_transcript | K02B2.5.1 | ||||||||
Other_sequence (64) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00008945 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049673 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093770 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033338 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00035443 | ||||||||
Construct_product | WBCnstr00035443 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (170) | |||||||||
Interaction (210) | |||||||||
Map_info | Map | IV | Position | 2.76481 | |||||
Positive | Positive_clone | K02B2 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005654 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |