WormBase Tree Display for Gene: WBGene00004492
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| WBGene00004492 | SMap | S_parent | Sequence | F28D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rps-23 | |||||||
| Sequence_name | F28D1.7 | ||||||||
| Molecular_name | F28D1.7a | ||||||||
| F28D1.7a.1 | |||||||||
| CE05747 | |||||||||
| F28D1.7b | |||||||||
| Other_name | CELE_F28D1.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | rps-23 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rps | ||||||||
| Allele (18) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps23 using blastP | ||||||||
| Strain | WBStrain00001593 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00011391 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | rps-23 encodes a small ribosomal subunit S23 protein; by homology, RPS-23 is predicted to function in protein biosynthesis; in C. elegans, RPS-23 activity is required for germline development, vulval morphogenesis, and the overall health of the animal. | Paper_evidence | WBPaper00005654 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit and polysomal ribosome. Human ortholog(s) of this gene implicated in brachycephaly, trichomegaly, and developmental delay. Is an ortholog of human RPS23 (ribosomal protein S23). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070415 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10410) | ||||
| Molecular_info | Corresponding_CDS | F28D1.7a | |||||||
| Corresponding_transcript | F28D1.7b | ||||||||
| F28D1.7a.1 | |||||||||
| Other_sequence (360) | |||||||||
| Associated_feature | WBsf652292 | ||||||||
| WBsf652293 | |||||||||
| WBsf981835 | |||||||||
| WBsf998102 | |||||||||
| WBsf998103 | |||||||||
| WBsf231013 | |||||||||
| WBsf231014 | |||||||||
| WBsf231015 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Chronogram525 | ||||||||
| Expr5902 | |||||||||
| Expr1028388 | |||||||||
| Expr1032295 | |||||||||
| Expr1149739 | |||||||||
| Expr2015518 | |||||||||
| Expr2033753 | |||||||||
| Drives_construct | WBCnstr00002433 | ||||||||
| WBCnstr00035444 | |||||||||
| Construct_product | WBCnstr00035444 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (223) | |||||||||
| Map_info | Map | IV | Position | 5.90161 | |||||
| Positive | Positive_clone | F28D1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024230 | ||||||||
| WBPaper00033166 | |||||||||
| WBPaper00035215 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040293 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00062338 | |||||||||
| WBPaper00065988 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
