WormBase Tree Display for Gene: WBGene00004483
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| WBGene00004483 | SMap | S_parent | Sequence | F37C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rps-14 | |||||||
| Sequence_name | F37C12.9 | ||||||||
| Molecular_name | F37C12.9 | ||||||||
| F37C12.9.1 | |||||||||
| CE00821 | |||||||||
| Other_name | CELE_F37C12.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rps-14 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rps | ||||||||
| Allele (15) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps14 using blastP | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00012244 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | rps-14 encodes a small ribosomal subunit S14 protein; by homology, RPS-14 is predicted to function in protein biosynthesis; in C. elegans, RPS-14 activity is required for embryonic and germline development, as well as the overall health of the animal; RPS-14 co-immuoprecipitates with ALG-1, a C. elegans Argonaut ortholog. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00005654 | |||||||||
| WBPaper00034755 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 03 Sep 2012 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit assembly and translation. Predicted to be located in cytoplasm; nucleolus; and ribosome. Predicted to be part of cytosolic small ribosomal subunit and small-subunit processome. Expressed in tail. Human ortholog(s) of this gene implicated in chromosome 5q deletion syndrome. Is an ortholog of human RPS14 (ribosomal protein S14). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0090016 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10387) | ||||
| Molecular_info | Corresponding_CDS | F37C12.9 | |||||||
| Corresponding_transcript | F37C12.9.1 | ||||||||
| Other_sequence (333) | |||||||||
| Associated_feature | WBsf651179 | ||||||||
| WBsf667044 | |||||||||
| WBsf667045 | |||||||||
| WBsf226924 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr5983 | ||||||||
| Expr1015336 | |||||||||
| Expr1032286 | |||||||||
| Expr1150501 | |||||||||
| Expr2015508 | |||||||||
| Expr2033743 | |||||||||
| Drives_construct | WBCnstr00002450 | ||||||||
| WBCnstr00035450 | |||||||||
| Construct_product | WBCnstr00035450 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction (238) | |||||||||
| Map_info | Map | III | Position | -0.776434 | Error | 0.00013 | |||
| Positive | Positive_clone | F37C12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005356 | ||||||||
| WBPaper00028564 | |||||||||
| WBPaper00034755 | |||||||||
| WBPaper00035149 | |||||||||
| WBPaper00035215 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060474 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
