WormBase Tree Display for Gene: WBGene00004454

WBGene00004454 SMap: S_parent: Sequence: C09H10
  Identity: Version: 2
    Name: CGC_name: rpl-36.A Person_evidence: WBPerson4025
      Sequence_name: C09H10.2
      Molecular_name: C09H10.2
        C09H10.2.1
        CE02131
        C09H10.2.2
      Other_name: 2L388 Accession_evidence: EMBL AF304121
        rpl-41
        CELE_C09H10.2 Accession_evidence: NDB BX284602
      Public_name: rpl-36.A
    DB_info: Database: AceView gene 2L388
        WormQTL gene WBGene00004454
        WormFlux gene WBGene00004454
        NDB locus_tag CELE_C09H10.2
        Panther gene CAEEL|WormBase=WBGene00004454|UniProtKB=P48166
          family PTHR10369
        NCBI gene 174695
        RefSeq protein NM_063974.8
        SwissProt UniProtAcc P48166
        TREEFAM TREEFAM_ID TF300213
        UniProt_GCRP UniProtAcc P48166
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 02 Oct 2015 11:36:38 WBPerson2970 Name_change: CGC_name: rpl-36.A
                Other_name: rpl-41
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele: WBVar01499702
      WBVar01477991
      WBVar01498435
      WBVar01499235
      WBVar00766792
      WBVar01499606
      WBVar02130695
      WBVar01498940
      WBVar00377688
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl41 using blastP
    RNASeq_FPKM (74)
    GO_annotation: 00046776
      00046777
      00046778
      00046779
      00112922
      00112923
      00112924
    Contained_in_operon: CEOP2717
    Ortholog (43)
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL36A (ribosomal protein L36a) and RPL36AL (ribosomal protein L36a like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C09H10.2
    Corresponding_transcript: C09H10.2.1
      C09H10.2.2
    Other_sequence (377)
    Associated_feature: WBsf989622
      WBsf223889
      WBsf223890
  Experimental_info: RNAi_result (40)
    Expr_pattern: Expr1021731
      Expr1032258
      Expr1144323
      Expr2015468
      Expr2033703
    Drives_construct: WBCnstr00037925
    Construct_product: WBCnstr00037925
    Microarray_results (18)
    Expression_cluster (157)
    Interaction (153)
  Map_info: Map: II Position: 3.21535 Error: 0.010685
    Positive: Positive_clone: C09H10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
  Remark: rpl-41 is described as Orthologous to yeast (S.cerevisiae) ribosomal protein rpl41 using blastP"; BlastP with S. cerevisiae Mak18p (gb|AAB68420) gives one hit in the genome with E < 0.01, C09H10.2 Person_evidence: WBPerson567
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene