WormBase Tree Display for Gene: WBGene00004450

WBGene00004450 SMap: S_parent: Sequence: F37C12
  Identity: Version: 1
    Name: CGC_name: rpl-36
      Sequence_name: F37C12.4
      Molecular_name: F37C12.4
        F37C12.4.1
        CE30781
      Other_name: CELE_F37C12.4 Accession_evidence: NDB BX284603
      Public_name: rpl-36
    DB_info: Database: AceView gene 3I271
        WormQTL gene WBGene00004450
        WormFlux gene WBGene00004450
        NDB locus_tag CELE_F37C12.4
        Panther gene CAEEL|WormBase=WBGene00004450|UniProtKB=P49181
          family PTHR10114
        NCBI gene 176007
        RefSeq protein NM_066172.10
        SwissProt UniProtAcc P49181
        TREEFAM TREEFAM_ID TF314463
        UniProt_GCRP UniProtAcc P49181
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (16)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl36 using blastP
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP3416
    Ortholog (48)
    Structured_description: Concise_description: rpl-36 encodes a large ribosomal subunit L36 protein; by homology, RPL-36 is predicted to function in protein biosynthesis; in C. elegans, RPL-36 activity is required for embryonic and germline development and normal postembryonic growth rates. Paper_evidence: WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in cytosol and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL36 (ribosomal protein L36). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F37C12.4
    Corresponding_transcript: F37C12.4.1
    Other_sequence: EX013628.1
      AS17257
      EH005337.1
      FE917485.1
      AI317931.1
      HC07438
      ES408691.1
      SR00958
      ES409134.1
      ES413435.1
      PPC04153_1
      AS10777
      NAC00511_1
      BXC00108_1
      HC07906
      NB09597
      GPC01511_1
      NBC01722_1
      AA756871.1
      PVC00068_1
      PT01083
      Tcol_isotig08026
      HC01439
      EX912994.1
      ES409980.1
      EX014307.1
      EX007231.1
      BU666893.1
      HBC22463_1
      DA04488
      SC00595
      CK850813.1
      AIC00118_1
      HC07702
      MCC05179_1
      ES413528.1
      HG06383
      PTC00395_1
      HC08933
      ES408872.1
      HCC00622_1
      CJC00294_1
      AE03201
      CRC01279_1
      RS06451
      CK855507.1
      NB07433
      EX916079.1
      ES741584.1
      RS11168
      FE910638.1
      FE919252.1
      BG467775.1
      GO252406.1
      GR978117.1
      JO475346.1
      BF727521.1
      EX009252.1
      HC07445
      MC01189
      AI046016.1
      CV198787.1
      AW244880.1
      ES743056.1
      AS04038
      MH10429
      EX011722.1
      ES739274.1
      HCC07771_1
      FE917028.1
      NB07602
      CB038378.1
      GU936300.1
      AS03381
      EX011756.1
      NB09537
      FE919012.1
      BU666474.1
      HC08138
      Tcir_isotig10070
      FE915759.1
      EX913075.1
      JK315854.1
      PT00863
      ES411699.1
      BE132571.1
      ASC00258_1
      SC01275
      ASC30514_1
      BU666679.1
      OOC00190_2
      CRC10502_1
      JI235736.1
      JI219048.1
      EX912605.1
      HBC09407_1
      FD515180.1
      GR978570.1
      Tcol_isotig08025
      Oden_isotig25925
      FE910266.1
      CJC00351_1
      HCC08062_1
      HC03532
      AS17316
      PT03838
      FE917010.1
      SRC00006_1
      DN557910.1
      PT03692
      ES413730.1
      CR08850
      CD374224.1
      HC09192
      GP00283
      ES411240.1
      ZPC00112_1
      Dviv_isotig35920
      AW505892.1
      MI08110
      CBC00044_1
      GT570771.1
      ES741780.1
      HBC00242_1
      FC821176.1
      EX014172.1
      ASC17451_1
      TDC00932_1
      JI179750.1
      ES413855.1
      RS07338
      AE00780
      DI00386
      HG03394
      EX912880.1
      EX910856.1
      ACC00978_1
      MIC05307_2
      BG468088.1
      RS06452
      MHC02783_1
      NBC08280_1
      WBC00207_1
      CBC14785_1
      ES739692.1
      ES743033.1
      FG975987.1
      FE911708.1
      ES739295.1
      HGC10333_1
      CJC06780_1
      PSC01399
      CSC02227_1
      FC820782.1
      Tcir_isotig05034
      ZP00182
      AYC00280_1
      JI182737.1
      MJ00529
      FE916592.1
      CD374738.1
      HBC09476_1
      EX008188.1
      ES412558.1
      AS02236
      Tcir_isotig19116
      ES411852.1
      DIC01661_1
      FE911899.1
      AJ277716.1
      OVC00601_1
      AS01934
      MIC05307_1
      AS00383
      SSC01267_1
      HCC10187_1
      Acan_isotig17782
      CV200629.1
      HBC12536_1
      ES409204.1
      FE913275.1
      NB09598
      CD455569.1
      PTC03426_1
      RS11169
      GRC00173_1
      EX012074.1
      FG975943.1
      CR09303
      GO239490.1
      HC07841
      BG809114.1
      GT571005.1
      EG025673.1
      JI180914.1
      PT04893
      EX014233.1
      FC821788.1
      SS01179
      FE911437.1
      CK855279.1
      BE132605.1
      MJC00037_1
      FC821430.1
      HSC01631_1
      HC03500
      AS03035
      AS16723
      RSC00078_1
      GW408278.1
      Hbac_isotig00246
      FE917661.1
      ES410677.1
      GR13642
      Tcol_isotig08024
      PPC00027_1
      AS07978
      ES741173.1
      FC820894.1
      AJ277716
      DAC00711_1
      FC821524.1
      ES413893.1
      PSC04832_1
      BF118497.1
      TCC02319_1
      WBC02074_1
      GO240644.1
      EF490128.1
      BMC00060_1
      MCC06043_1
      ES740442.1
      RSC00232_1
      GO239427.1
      Acan_isotig15012
      RS07012
      HG06828
      EX912521.1
      MJ01204
      CR08851
      JI212739.1
      LSC00902_1
      BMC00060_4
      PT03682
      AS08197
      TX01934
      ES744391.1
      EX916102.1
      ES408707.1
      HG06445
      ES744404.1
      PT04482
      AS00563
      HCC10150_1
      HS00375
      CR09714
      ALC00218_1
      Tcir_isotig05033
      HGC00063_1
      CR02647
      SRC09547_1
      EL887624.1
      PTC04423_1
      EX910097.1
      HGC09903_1
      AYC00280_2
      GW407678.1
      HC02379
      WBC00207_2
      GO249843.1
      GO248978.1
      MH02214
      GO249312.1
      PP00396
      GT570991.1
      ES411496.1
      EX912028.1
      BU585655.1
      HC02370
      GW407719.1
      AE01133
      PTC00088_1
    Associated_feature: WBsf654975
      WBsf225206
      WBsf225207
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1026550
      Expr1032254
      Expr1150499
      Expr2015469
      Expr2033704
    Drives_construct: WBCnstr00035476
    Construct_product: WBCnstr00035476
    Microarray_results (19)
    Expression_cluster (169)
    Interaction (206)
  Map_info: Map: III Position: -0.776104 Error: 0.000137
    Positive: Positive_clone: F37C12 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006028
    WBPaper00035228
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00065861
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene