WormBase Tree Display for Gene: WBGene00004443

WBGene00004443 SMap: S_parent: Sequence: B0513
  Identity: Version: 1
    Name: CGC_name: rpl-29
      Sequence_name: B0513.3
      Molecular_name: B0513.3a
        B0513.3a.1
        CE15559
        B0513.3b
        CE44704
        B0513.3b.1
      Other_name: CELE_B0513.3 Accession_evidence: NDB BX284604
      Public_name: rpl-29
    DB_info: Database: AceView gene 4O647
        WormQTL gene WBGene00004443
        WormFlux gene WBGene00004443
        NDB locus_tag CELE_B0513.3
        Panther gene CAEEL|WormBase=WBGene00004443|UniProtKB=O45226
          family PTHR12884
        NCBI gene 178352
        RefSeq protein NM_001268835.3
            NM_001268834.2
        TrEMBL UniProtAcc D3YT71
            O45226
        UniProt_GCRP UniProtAcc O45226
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (23)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl29 using blastP
      NMK. 0.6 kb transcript, transspliced to SL1;encodes predicted ribosomal protein (87%identical to yeast).[Bektesh et al. 1988; DH]
    Strain: WBStrain00005441
      WBStrain00050657
    RNASeq_FPKM (74)
    GO_annotation: 00007523
      00007524
      00007525
      00007526
      00034046
      00034047
      00112889
      00112890
      00112891
    Contained_in_operon: CEOP4568
    Ortholog (25)
    Structured_description: Concise_description: rpl-29 encodes a large ribosomal subunit L29 protein; by homology, RPL-29 is predicted to function in protein biosynthesis; in C. elegans, loss of rpl-29 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities. Paper_evidence: WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL29 (ribosomal protein L29). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0513.3a
      B0513.3b
    Corresponding_transcript: B0513.3a.1
      B0513.3b.1
    Associated_feature: WBsf646542
      WBsf646543
      WBsf981844
      WBsf998474
      WBsf1018579
      WBsf229463
      WBsf229464
  Experimental_info: RNAi_result: WBRNAi00009830 Inferred_automatically: RNAi_primary
      WBRNAi00093769 Inferred_automatically: RNAi_primary
      WBRNAi00039155 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15108
      Expr1023321
      Expr1032247
      Expr1143310
      Expr2015460
      Expr2033695
    Drives_construct: WBCnstr00035482
      WBCnstr00039102
    Construct_product: WBCnstr00035482
      WBCnstr00039102
    Microarray_results (24)
    Expression_cluster (125)
    Interaction: WBInteraction000105870
      WBInteraction000107483
      WBInteraction000107530
      WBInteraction000107829
      WBInteraction000107967
      WBInteraction000107968
      WBInteraction000107969
      WBInteraction000107970
      WBInteraction000107971
      WBInteraction000107972
      WBInteraction000107973
      WBInteraction000107974
      WBInteraction000107975
      WBInteraction000107976
      WBInteraction000107977
      WBInteraction000107978
      WBInteraction000107979
      WBInteraction000107980
      WBInteraction000107981
      WBInteraction000107982
      WBInteraction000107983
      WBInteraction000107984
      WBInteraction000107985
      WBInteraction000107986
      WBInteraction000107987
      WBInteraction000107988
      WBInteraction000107989
      WBInteraction000107990
      WBInteraction000107991
      WBInteraction000107992
      WBInteraction000107993
      WBInteraction000107994
      WBInteraction000107995
      WBInteraction000107996
      WBInteraction000107997
      WBInteraction000107998
      WBInteraction000107999
      WBInteraction000108000
      WBInteraction000108001
      WBInteraction000108002
      WBInteraction000108003
      WBInteraction000108004
      WBInteraction000108005
      WBInteraction000108006
      WBInteraction000108007
      WBInteraction000108008
      WBInteraction000108009
      WBInteraction000116339
      WBInteraction000129253
      WBInteraction000129254
      WBInteraction000129255
      WBInteraction000129256
      WBInteraction000129257
      WBInteraction000129258
      WBInteraction000129259
      WBInteraction000129260
      WBInteraction000129261
      WBInteraction000129262
      WBInteraction000129263
      WBInteraction000129264
      WBInteraction000129265
      WBInteraction000129266
      WBInteraction000129267
      WBInteraction000129268
      WBInteraction000129269
      WBInteraction000129270
      WBInteraction000129271
      WBInteraction000129272
      WBInteraction000129273
      WBInteraction000129274
      WBInteraction000129275
      WBInteraction000129276
      WBInteraction000129277
      WBInteraction000129278
      WBInteraction000129279
      WBInteraction000129280
      WBInteraction000129281
      WBInteraction000129282
      WBInteraction000129283
      WBInteraction000129284
      WBInteraction000129469
      WBInteraction000130051
      WBInteraction000153795
      WBInteraction000154007
      WBInteraction000154805
      WBInteraction000154806
      WBInteraction000154807
      WBInteraction000154808
      WBInteraction000154809
      WBInteraction000154810
      WBInteraction000154811
      WBInteraction000154812
      WBInteraction000154813
      WBInteraction000154814
      WBInteraction000154815
      WBInteraction000154816
      WBInteraction000154817
      WBInteraction000154818
      WBInteraction000154819
      WBInteraction000154820
      WBInteraction000154821
      WBInteraction000154822
      WBInteraction000154823
      WBInteraction000182125
      WBInteraction000187680
      WBInteraction000203850
      WBInteraction000209465
      WBInteraction000222350
      WBInteraction000240140
      WBInteraction000254882
      WBInteraction000265470
      WBInteraction000265471
      WBInteraction000265472
      WBInteraction000265473
      WBInteraction000385716
      WBInteraction000415189
      WBInteraction000419959
      WBInteraction000420208
      WBInteraction000424344
      WBInteraction000454910
      WBInteraction000469653
      WBInteraction000553097
      WBInteraction000553501
      WBInteraction000561729
      WBInteraction000562063
      WBInteraction000568540
      WBInteraction000569118
      WBInteraction000569382
      WBInteraction000575462
      WBInteraction000582764
  Map_info: Map: IV Position: 10.8984 Error: 0.001533
    Positive: Positive_clone: B0513 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002874
    WBPaper00025088
    WBPaper00035149
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene