WormBase Tree Display for Gene: WBGene00004391
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| WBGene00004391 | SMap | S_parent | Sequence | T23G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rnr-1 | Person_evidence | WBPerson732 | |||||
| Sequence_name | T23G5.1 | ||||||||
| Molecular_name | T23G5.1 | ||||||||
| T23G5.1.1 | |||||||||
| CE00331 | |||||||||
| T23G5.1.2 | |||||||||
| Other_name | CELE_T23G5.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rnr-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnr | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00002226 | ||||||||
| WBStrain00007244 | |||||||||
| WBStrain00007246 | |||||||||
| WBStrain00001716 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (47) | |||||||||
| Structured_description | Concise_description | rnr-1 encodes the large subunit of ribonucleotide reductase; by homology, RNR-1 is predicted to function in deoxyribonucleotide biosynthesis; in C. elegans rnr-1 is an essential gene whose activity is required for reproduction and embryonic development. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 02 Aug 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor. Predicted to be involved in deoxyribonucleotide biosynthetic process. Predicted to be part of ribonucleoside-diphosphate reductase complex. Expressed in head; somatic gonad precursor; and tail. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human RRM1 (ribonucleotide reductase catalytic subunit M1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10451) | ||||
| DOID:12558 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10451) | ||||||
| Molecular_info | Corresponding_CDS | T23G5.1 | |||||||
| Corresponding_transcript | T23G5.1.1 | ||||||||
| T23G5.1.2 | |||||||||
| Other_sequence | FC550799.1 | ||||||||
| CR04526 | |||||||||
| ACC34623_1 | |||||||||
| SS01719 | |||||||||
| AM157811.1 | |||||||||
| SSC02582_1 | |||||||||
| EX535453.1 | |||||||||
| Acan_isotig00966 | |||||||||
| MIC04836_1 | |||||||||
| MHC02812_1 | |||||||||
| EX565468.1 | |||||||||
| FC817421.1 | |||||||||
| ACC05889_1 | |||||||||
| SR04881 | |||||||||
| Acan_isotig00965 | |||||||||
| FK809668.1 | |||||||||
| AE03384 | |||||||||
| EY469211.1 | |||||||||
| EX560349.1 | |||||||||
| PPC12633_1 | |||||||||
| FC819818.1 | |||||||||
| CGC00101_1 | |||||||||
| PSC00556_1 | |||||||||
| Tcol_isotig01417 | |||||||||
| Tcir_isotig00503 | |||||||||
| FC810668.1 | |||||||||
| Tcol_isotig01419 | |||||||||
| Tcol_isotig01415 | |||||||||
| EX552489.1 | |||||||||
| RS06926 | |||||||||
| EY464259.1 | |||||||||
| FC550922.1 | |||||||||
| Tcol_isotig01416 | |||||||||
| SR04619 | |||||||||
| MHC03141_1 | |||||||||
| SS02068 | |||||||||
| Tcol_isotig01418 | |||||||||
| MH06965 | |||||||||
| EY472815.1 | |||||||||
| TIC00061_1 | |||||||||
| MI06512 | |||||||||
| FK809956.1 | |||||||||
| GW406080.1 | |||||||||
| ODC00073_1 | |||||||||
| JI476335.1 | |||||||||
| EX535866.1 | |||||||||
| EX560041.1 | |||||||||
| CRC03709_1 | |||||||||
| PPC05147_1 | |||||||||
| SRC01799_1 | |||||||||
| Hbac_isotig01243 | |||||||||
| EY466443.1 | |||||||||
| FC553819.1 | |||||||||
| FC542143.1 | |||||||||
| FC811840.1 | |||||||||
| FC547447.1 | |||||||||
| BQ804054.1 | |||||||||
| HBC10050_1 | |||||||||
| OOC03861_1 | |||||||||
| EX561933.1 | |||||||||
| SSC00047_1 | |||||||||
| FC820158.1 | |||||||||
| FC539738.1 | |||||||||
| EG025758.1 | |||||||||
| EY459810.1 | |||||||||
| EY460483.1 | |||||||||
| FC813899.1 | |||||||||
| HG07872 | |||||||||
| AM157823.1 | |||||||||
| SS00752 | |||||||||
| MH06803 | |||||||||
| FC816105.1 | |||||||||
| PPC10228_1 | |||||||||
| FK808632.1 | |||||||||
| EY469300.1 | |||||||||
| BXC04407_1 | |||||||||
| Tcir_isotig00504 | |||||||||
| EX559709.1 | |||||||||
| Acan_isotig00963 | |||||||||
| HG00258 | |||||||||
| CRC12168_1 | |||||||||
| EX554094.1 | |||||||||
| MIC05481_1 | |||||||||
| CR02224 | |||||||||
| CJC01033_1 | |||||||||
| AYC01734_1 | |||||||||
| AJ616419.1 | |||||||||
| CGC00827_1 | |||||||||
| SRC09090_1 | |||||||||
| EW744046.1 | |||||||||
| CRC00108_1 | |||||||||
| MH00935 | |||||||||
| EY465819.1 | |||||||||
| HGC04333_1 | |||||||||
| Dviv_isotig17373 | |||||||||
| RSC03547_1 | |||||||||
| SSC03855_1 | |||||||||
| EW743439.1 | |||||||||
| EX564400.1 | |||||||||
| EY473155.1 | |||||||||
| Acan_isotig00964 | |||||||||
| JI167846.1 | |||||||||
| CR05959 | |||||||||
| SRC06081_1 | |||||||||
| CR08803 | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00000444 | ||||||||
| WBCnstr00000446 | |||||||||
| WBCnstr00000447 | |||||||||
| WBCnstr00000929 | |||||||||
| WBCnstr00002540 | |||||||||
| WBCnstr00004370 | |||||||||
| WBCnstr00007949 | |||||||||
| WBCnstr00008139 | |||||||||
| WBCnstr00035516 | |||||||||
| Construct_product | WBCnstr00035516 | ||||||||
| Antibody | WBAntibody00001448 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (236) | |||||||||
| Interaction (152) | |||||||||
| Map_info | Map | III | Position | 0.326335 | Error | 0.008197 | |||
| Positive | Positive_clone | T23G5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence connection from [Ambros V] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
