WormBase Tree Display for Gene: WBGene00004391
expand all nodes | collapse all nodes | view schema
| WBGene00004391 | SMap | S_parent | Sequence | T23G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rnr-1 | Person_evidence | WBPerson732 | |||||
| Sequence_name | T23G5.1 | ||||||||
| Molecular_name | T23G5.1 | ||||||||
| T23G5.1.1 | |||||||||
| CE00331 | |||||||||
| T23G5.1.2 | |||||||||
| Other_name | CELE_T23G5.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rnr-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnr | ||||||||
| Allele | WBVar01409097 | ||||||||
| WBVar00404924 | |||||||||
| WBVar00404925 | |||||||||
| WBVar00404926 | |||||||||
| WBVar01500260 | |||||||||
| WBVar01447440 | |||||||||
| WBVar01723120 | |||||||||
| WBVar00233990 | |||||||||
| WBVar00849251 | |||||||||
| WBVar00849252 | |||||||||
| WBVar00849253 | |||||||||
| WBVar00849254 | |||||||||
| WBVar00849255 | |||||||||
| WBVar00849256 | |||||||||
| WBVar00849257 | |||||||||
| WBVar00849258 | |||||||||
| WBVar00849259 | |||||||||
| WBVar00849260 | |||||||||
| WBVar00849261 | |||||||||
| WBVar00849262 | |||||||||
| WBVar00849263 | |||||||||
| WBVar00849264 | |||||||||
| WBVar00849265 | |||||||||
| WBVar01499774 | |||||||||
| WBVar00849266 | |||||||||
| WBVar00849267 | |||||||||
| WBVar02132489 | |||||||||
| WBVar00251811 | |||||||||
| WBVar01629259 | |||||||||
| WBVar01629260 | |||||||||
| WBVar01896377 | |||||||||
| WBVar00070453 | |||||||||
| WBVar01939503 | |||||||||
| WBVar00307938 | |||||||||
| WBVar00404922 | |||||||||
| WBVar00404923 | |||||||||
| Strain | WBStrain00002226 | ||||||||
| WBStrain00007244 | |||||||||
| WBStrain00007246 | |||||||||
| WBStrain00001716 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (47) | |||||||||
| Structured_description | Concise_description | rnr-1 encodes the large subunit of ribonucleotide reductase; by homology, RNR-1 is predicted to function in deoxyribonucleotide biosynthesis; in C. elegans rnr-1 is an essential gene whose activity is required for reproduction and embryonic development. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 02 Aug 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor. Predicted to be involved in deoxyribonucleotide biosynthetic process. Predicted to be part of ribonucleoside-diphosphate reductase complex. Expressed in head; somatic gonad precursor; and tail. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human RRM1 (ribonucleotide reductase catalytic subunit M1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10451) | ||||
| DOID:12558 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10451) | ||||||
| Molecular_info | Corresponding_CDS | T23G5.1 | |||||||
| Corresponding_transcript | T23G5.1.1 | ||||||||
| T23G5.1.2 | |||||||||
| Other_sequence (105) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00000444 | ||||||||
| WBCnstr00000446 | |||||||||
| WBCnstr00000447 | |||||||||
| WBCnstr00000929 | |||||||||
| WBCnstr00002540 | |||||||||
| WBCnstr00004370 | |||||||||
| WBCnstr00007949 | |||||||||
| WBCnstr00008139 | |||||||||
| WBCnstr00035516 | |||||||||
| Construct_product | WBCnstr00035516 | ||||||||
| Antibody | WBAntibody00001448 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (236) | |||||||||
| Interaction (152) | |||||||||
| Map_info | Map | III | Position | 0.326335 | Error | 0.008197 | |||
| Positive | Positive_clone | T23G5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence connection from [Ambros V] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
