WormBase Tree Display for Gene: WBGene00004339

WBGene00004339 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C39E9
  Identity: Version: 1
    Name: CGC_name: rfc-3 Person_evidence: WBPerson1551
      Sequence_name: C39E9.13
      Molecular_name: C39E9.13
        C39E9.13.1
        CE05396
      Other_name: CELE_C39E9.13 Accession_evidence: NDB BX284604
      Public_name: rfc-3
    DB_info: Database: AceView gene 4N861
        WormQTL gene WBGene00004339
        WormFlux gene WBGene00004339
        NDB locus_tag CELE_C39E9.13
        Panther gene CAEEL|WormBase=WBGene00004339|UniProtKB=Q18547
          family PTHR11669
        NCBI gene 178259
        RefSeq protein NM_070116.9
        TREEFAM TREEFAM_ID TF105724
        TrEMBL UniProtAcc Q18547
        UniProt_GCRP UniProtAcc Q18547
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rfc
    Allele (23)
    Strain: WBStrain00051187
    RNASeq_FPKM (74)
    GO_annotation: 00061616
      00061617
      00061618
      00061619
      00061620
      00061621
      00112692
      00112693
    Contained_in_operon: CEOP4528
    Ortholog (36)
    Paralog: WBGene00004338 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004340 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018409 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA repair and DNA-templated DNA replication. Predicted to be located in nucleus. Predicted to be part of DNA replication factor C complex. Is an ortholog of human RFC3 (replication factor C subunit 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C39E9.13
    Corresponding_transcript: C39E9.13.1
    Other_sequence (38)
    Associated_feature: WBsf659815
      WBsf977015
      WBsf229385
  Experimental_info: RNAi_result: WBRNAi00008506 Inferred_automatically: RNAi_primary
      WBRNAi00007957 Inferred_automatically: RNAi_primary
      WBRNAi00042218 Inferred_automatically: RNAi_primary
      WBRNAi00000155 Inferred_automatically: RNAi_primary
      WBRNAi00103213 Inferred_automatically: RNAi_primary
      WBRNAi00064084 Inferred_automatically: RNAi_primary
      WBRNAi00024783 Inferred_automatically: RNAi_primary
      WBRNAi00106721 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021222
      Expr1032157
      Expr1146209
      Expr2015305
      Expr2033539
    Drives_construct: WBCnstr00035556
    Construct_product: WBCnstr00035556
    Microarray_results (22)
    Expression_cluster (163)
    Interaction: WBInteraction000009373
      WBInteraction000031221
      WBInteraction000032562
      WBInteraction000033695
      WBInteraction000034268
      WBInteraction000034687
      WBInteraction000034688
      WBInteraction000034735
      WBInteraction000034912
      WBInteraction000035191
      WBInteraction000036405
      WBInteraction000036931
      WBInteraction000037177
      WBInteraction000037749
      WBInteraction000037778
      WBInteraction000038273
      WBInteraction000038274
      WBInteraction000038435
      WBInteraction000038921
      WBInteraction000039936
      WBInteraction000041482
      WBInteraction000042992
      WBInteraction000042993
      WBInteraction000044911
      WBInteraction000044912
      WBInteraction000045417
      WBInteraction000045790
      WBInteraction000046616
      WBInteraction000047215
      WBInteraction000047774
      WBInteraction000047968
      WBInteraction000102252
      WBInteraction000102991
      WBInteraction000103539
      WBInteraction000104016
      WBInteraction000106462
      WBInteraction000113076
      WBInteraction000114695
      WBInteraction000116102
      WBInteraction000116307
      WBInteraction000119651
      WBInteraction000120856
      WBInteraction000123976
      WBInteraction000125394
      WBInteraction000125395
      WBInteraction000125583
      WBInteraction000128841
      WBInteraction000128842
      WBInteraction000128843
      WBInteraction000128844
      WBInteraction000128845
      WBInteraction000128846
      WBInteraction000128847
      WBInteraction000128848
      WBInteraction000136188
      WBInteraction000139179
      WBInteraction000139376
      WBInteraction000141056
      WBInteraction000146845
      WBInteraction000154123
      WBInteraction000154408
      WBInteraction000154409
      WBInteraction000154410
      WBInteraction000154411
      WBInteraction000154412
      WBInteraction000154413
      WBInteraction000154414
      WBInteraction000154415
      WBInteraction000154416
      WBInteraction000154417
      WBInteraction000154418
      WBInteraction000154419
      WBInteraction000154420
      WBInteraction000154421
      WBInteraction000173745
      WBInteraction000180043
      WBInteraction000181825
      WBInteraction000185733
      WBInteraction000192649
      WBInteraction000196822
      WBInteraction000198850
      WBInteraction000201033
      WBInteraction000201781
      WBInteraction000204648
      WBInteraction000204662
      WBInteraction000205349
      WBInteraction000211965
      WBInteraction000213309
      WBInteraction000213507
      WBInteraction000213917
      WBInteraction000220436
      WBInteraction000220941
      WBInteraction000222017
      WBInteraction000222540
      WBInteraction000225921
      WBInteraction000226308
      WBInteraction000227315
      WBInteraction000227864
      WBInteraction000232494
      WBInteraction000235462
      WBInteraction000237262
      WBInteraction000240348
      WBInteraction000250621
      WBInteraction000251743
      WBInteraction000253586
      WBInteraction000254850
      WBInteraction000256405
      WBInteraction000262460
      WBInteraction000264059
      WBInteraction000265326
      WBInteraction000265789
      WBInteraction000267572
      WBInteraction000269228
      WBInteraction000272491
      WBInteraction000273250
      WBInteraction000273251
      WBInteraction000273252
      WBInteraction000274403
      WBInteraction000274854
      WBInteraction000275309
      WBInteraction000277100
      WBInteraction000277791
      WBInteraction000281115
      WBInteraction000287343
      WBInteraction000288697
      WBInteraction000290279
      WBInteraction000290564
      WBInteraction000290619
      WBInteraction000290749
      WBInteraction000293775
      WBInteraction000294525
      WBInteraction000297277
      WBInteraction000298696
      WBInteraction000300108
      WBInteraction000308174
      WBInteraction000309262
      WBInteraction000309437
      WBInteraction000310204
      WBInteraction000314847
      WBInteraction000317517
      WBInteraction000318629
      WBInteraction000318709
      WBInteraction000329206
      WBInteraction000330000
      WBInteraction000333636
      WBInteraction000333731
      WBInteraction000336261
      WBInteraction000338320
      WBInteraction000340175
      WBInteraction000343090
      WBInteraction000344042
      WBInteraction000349565
      WBInteraction000351494
      WBInteraction000353266
      WBInteraction000357072
      WBInteraction000357932
      WBInteraction000359277
      WBInteraction000360021
      WBInteraction000370655
      WBInteraction000372534
      WBInteraction000375931
      WBInteraction000377353
      WBInteraction000380030
      WBInteraction000380218
      WBInteraction000380611
      WBInteraction000383134
      WBInteraction000383606
      WBInteraction000390649
      WBInteraction000393463
      WBInteraction000393618
      WBInteraction000396028
      WBInteraction000400538
      WBInteraction000400970
      WBInteraction000401833
      WBInteraction000402357
      WBInteraction000403999
      WBInteraction000405014
      WBInteraction000406907
      WBInteraction000408910
      WBInteraction000410880
      WBInteraction000414249
      WBInteraction000415232
      WBInteraction000417413
      WBInteraction000420248
      WBInteraction000422549
      WBInteraction000425029
      WBInteraction000425730
      WBInteraction000427711
      WBInteraction000427957
      WBInteraction000430766
      WBInteraction000432902
      WBInteraction000434087
      WBInteraction000434968
      WBInteraction000436472
      WBInteraction000437615
      WBInteraction000438252
      WBInteraction000454962
      WBInteraction000456252
      WBInteraction000457042
      WBInteraction000457338
      WBInteraction000458500
      WBInteraction000462928
      WBInteraction000465664
      WBInteraction000466374
      WBInteraction000468073
      WBInteraction000470060
      WBInteraction000512174
      WBInteraction000512180
      WBInteraction000523239
      WBInteraction000523240
      WBInteraction000523334
      WBInteraction000539885
      WBInteraction000539886
      WBInteraction000539935
      WBInteraction000549271
      WBInteraction000551011
      WBInteraction000559121
      WBInteraction000573526
      WBInteraction000575112
  Map_info: Map: IV Position: 7.86285 Error: 0.014603
    Positive: Positive_clone: C39E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005736
    WBPaper00038491
    WBPaper00048493
    WBPaper00055090
    WBPaper00064957
  Remark: Sequence connection from [Boulton S, Vidal M]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene