WormBase Tree Display for Gene: WBGene00004340
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WBGene00004340 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F31E3 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | rfc-4 | Person_evidence | WBPerson1551 | |||||
Sequence_name | F31E3.3 | ||||||||
Molecular_name | F31E3.3 | ||||||||
F31E3.3.1 | |||||||||
CE01268 | |||||||||
Other_name | CELE_F31E3.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | rfc-4 | ||||||||
DB_info | Database | AceView | gene | 3I63 | |||||
WormQTL | gene | WBGene00004340 | |||||||
WormFlux | gene | WBGene00004340 | |||||||
NDB | locus_tag | CELE_F31E3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004340|UniProtKB=P53016 | |||||||
family | PTHR11669 | ||||||||
NCBI | gene | 175976 | |||||||
RefSeq | protein | NM_066120.8 | |||||||
SwissProt | UniProtAcc | P53016 | |||||||
TREEFAM | TREEFAM_ID | TF314424 | |||||||
UniProt_GCRP | UniProtAcc | P53016 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rfc | ||||||||
Allele (15) | |||||||||
Strain | WBStrain00051259 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00004338 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00004339 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018409 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to contribute to DNA clamp loader activity. Involved in DNA replication. Predicted to be located in nucleus. Predicted to be part of DNA replication factor C complex. Is an ortholog of human RFC4 (replication factor C subunit 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F31E3.3 | |||||||
Corresponding_transcript | F31E3.3.1 | ||||||||
Other_sequence (15) | |||||||||
Associated_feature | WBsf645307 | ||||||||
WBsf225184 | |||||||||
WBsf225185 | |||||||||
Experimental_info | RNAi_result | WBRNAi00082612 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046020 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002743 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002514 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007834 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082392 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008733 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046019 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017784 | ||||||||
Expr1032158 | |||||||||
Expr1149917 | |||||||||
Expr2015306 | |||||||||
Expr2033540 | |||||||||
Drives_construct | WBCnstr00035555 | ||||||||
Construct_product | WBCnstr00035555 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (140) | |||||||||
Interaction (311) | |||||||||
Map_info | Map | III | Position | -0.862057 | Error | 0.003826 | |||
Positive | Positive_clone | F31E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005880 | ||||||||
WBPaper00026952 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Sequence connection from [Boulton S, Vidal M] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |