WormBase Tree Display for Gene: WBGene00004315

WBGene00004315 SMap: S_parent: Sequence: T23F6
  Identity: Version: 1
    Name: CGC_name: rbd-1 Person_evidence: WBPerson83
      Sequence_name: T23F6.4
      Molecular_name: T23F6.4a
        T23F6.4a.1
        CE18963
        T23F6.4b
        CE49797
        T23F6.4b.1
      Other_name: CELE_T23F6.4 Accession_evidence: NDB BX284604
      Public_name: rbd-1
    DB_info: Database: AceView gene 4N493
        WormQTL gene WBGene00004315
        WormFlux gene WBGene00004315
        NDB locus_tag CELE_T23F6.4
        Panther gene CAEEL|WormBase=WBGene00004315|UniProtKB=Q9XU67
          family PTHR23147
        NCBI gene 178229
        RefSeq protein NM_001306991.3
            NM_070031.6
        TrEMBL UniProtAcc Q9XU67
            A0A061AJ27
        UniProt_GCRP UniProtAcc Q9XU67
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rbd
    Allele (73)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (37)
    Paralog (17)
    Structured_description: Concise_description: rbd-1 encodes an ortholog of S. cerevisiae Mrd1p; RBD-1 is required for processing of 18S rRNA and subsequent formation of the 40S ribosomal subunit, and is essential for normal development; in addition, RBD-1 may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, RBD-1's role in ribosome biogenesis suggests a link between biogenesis in the distal sheath and control of cell division in the germ line; RBD-1 localizes to the nucleolus. Paper_evidence: WBPaper00006468
            WBPaper00028280
            WBPaper00028942
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 30 Sep 2009 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Involved in several processes, including collagen and cuticulin-based cuticle development; positive regulation of growth rate; and vulval development. Located in nucleolus. Is an ortholog of human RBM19 (RNA binding motif protein 19). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T23F6.4a
      T23F6.4b
    Corresponding_transcript: T23F6.4a.1
      T23F6.4b.1
    Other_sequence (35)
    Associated_feature: WBsf646483
      WBsf646484
      WBsf660832
      WBsf660833
      WBsf998203
      WBsf1018414
      WBsf1018415
      WBsf229318
      WBsf229319
      WBsf229320
  Experimental_info: RNAi_result: WBRNAi00026380 Inferred_automatically: RNAi_primary
      WBRNAi00035878 Inferred_automatically: RNAi_primary
      WBRNAi00009216 Inferred_automatically: RNAi_primary
      WBRNAi00063100 Inferred_automatically: RNAi_primary
      WBRNAi00007226 Inferred_automatically: RNAi_primary
      WBRNAi00053959 Inferred_automatically: RNAi_primary
      WBRNAi00110904 Inferred_automatically: RNAi_primary
      WBRNAi00062052 Inferred_automatically: RNAi_primary
      WBRNAi00065762 Inferred_automatically: RNAi_primary
      WBRNAi00063099 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2904
      Expr2905
      Expr2906
      Expr1025021
      Expr1032140
      Expr1157504
      Expr2015266
      Expr2033500
    Drives_construct: WBCnstr00011017
      WBCnstr00035569
    Construct_product: WBCnstr00035569
    Antibody: WBAntibody00000728
    Microarray_results (22)
    Expression_cluster (127)
    Interaction: WBInteraction000031615
      WBInteraction000105818
      WBInteraction000109668
      WBInteraction000110994
      WBInteraction000111902
      WBInteraction000122334
      WBInteraction000125788
      WBInteraction000134608
      WBInteraction000136632
      WBInteraction000137119
      WBInteraction000137357
      WBInteraction000138745
      WBInteraction000141463
      WBInteraction000149868
      WBInteraction000152172
      WBInteraction000157633
      WBInteraction000157738
      WBInteraction000160452
      WBInteraction000162137
      WBInteraction000172756
      WBInteraction000174601
      WBInteraction000174790
      WBInteraction000175354
      WBInteraction000176534
      WBInteraction000177401
      WBInteraction000177759
      WBInteraction000179403
      WBInteraction000181400
      WBInteraction000181688
      WBInteraction000181718
      WBInteraction000181990
      WBInteraction000183024
      WBInteraction000186320
      WBInteraction000186661
      WBInteraction000190106
      WBInteraction000190860
      WBInteraction000192137
      WBInteraction000193024
      WBInteraction000194537
      WBInteraction000198883
      WBInteraction000199060
      WBInteraction000201517
      WBInteraction000201616
      WBInteraction000204636
      WBInteraction000207207
      WBInteraction000208860
      WBInteraction000209980
      WBInteraction000218981
      WBInteraction000221506
      WBInteraction000223708
      WBInteraction000225351
      WBInteraction000226131
      WBInteraction000232668
      WBInteraction000233189
      WBInteraction000238021
      WBInteraction000240690
      WBInteraction000241771
      WBInteraction000252410
      WBInteraction000253407
      WBInteraction000258376
      WBInteraction000258526
      WBInteraction000266308
      WBInteraction000266571
      WBInteraction000274520
      WBInteraction000275054
      WBInteraction000275890
      WBInteraction000281774
      WBInteraction000282340
      WBInteraction000283498
      WBInteraction000287451
      WBInteraction000288103
      WBInteraction000292341
      WBInteraction000294308
      WBInteraction000294716
      WBInteraction000298800
      WBInteraction000299642
      WBInteraction000300906
      WBInteraction000305446
      WBInteraction000307683
      WBInteraction000309484
      WBInteraction000332580
      WBInteraction000334745
      WBInteraction000335269
      WBInteraction000336446
      WBInteraction000337378
      WBInteraction000337979
      WBInteraction000338678
      WBInteraction000339463
      WBInteraction000352635
      WBInteraction000352698
      WBInteraction000357417
      WBInteraction000357800
      WBInteraction000360206
      WBInteraction000362018
      WBInteraction000363539
      WBInteraction000364428
      WBInteraction000366488
      WBInteraction000370505
      WBInteraction000371142
      WBInteraction000371639
      WBInteraction000375272
      WBInteraction000378343
      WBInteraction000380568
      WBInteraction000388693
      WBInteraction000389566
      WBInteraction000390777
      WBInteraction000396332
      WBInteraction000397192
      WBInteraction000405469
      WBInteraction000411091
      WBInteraction000413326
      WBInteraction000416934
      WBInteraction000422757
      WBInteraction000426037
      WBInteraction000427632
      WBInteraction000427865
      WBInteraction000441110
      WBInteraction000442724
      WBInteraction000445760
      WBInteraction000447284
      WBInteraction000447906
      WBInteraction000451655
      WBInteraction000462265
      WBInteraction000463825
      WBInteraction000464210
      WBInteraction000466030
      WBInteraction000468656
      WBInteraction000468917
      WBInteraction000469539
      WBInteraction000471705
      WBInteraction000472955
      WBInteraction000474159
      WBInteraction000474283
      WBInteraction000557943
      WBInteraction000583101
    WBProcess: WBbiopr:00000096
  Map_info: Map: IV Position: 6.14604 Error: 0.004844
    Positive: Positive_clone: T23F6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005532
    WBPaper00006468
    WBPaper00028280
    WBPaper00038491
    WBPaper00040903
    WBPaper00044821
    WBPaper00055090
    WBPaper00064080
    WBPaper00065012
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene