WormBase Tree Display for Gene: WBGene00004277
expand all nodes | collapse all nodes | view schema
| WBGene00004277 | SMap | S_parent | Sequence | Y92C3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rab-18 | Person_evidence | WBPerson451 | |||||
| Sequence_name | Y92C3B.3 | ||||||||
| Molecular_name | Y92C3B.3a | ||||||||
| Y92C3B.3a.1 | |||||||||
| CE34438 | |||||||||
| Y92C3B.3b | |||||||||
| CE27340 | |||||||||
| Y92C3B.3a.2 | |||||||||
| Y92C3B.3b.1 | |||||||||
| Y92C3B.3b.2 | |||||||||
| Other_name | pra-1 | Accession_evidence | EMBL | U23938 | |||||
| CELE_Y92C3B.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | rab-18 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rab | ||||||||
| Allele (79) | |||||||||
| Strain | WBStrain00032332 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084671 | ||||||||
| 00084672 | |||||||||
| 00084673 | |||||||||
| 00084674 | |||||||||
| 00084675 | |||||||||
| 00084676 | |||||||||
| 00084677 | |||||||||
| 00084678 | |||||||||
| 00112596 | |||||||||
| 00112597 | |||||||||
| Contained_in_operon | CEOP3052 | ||||||||
| Ortholog (43) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Concise_description | rab-18 encodes a small GTPase homologous to the Rab GTPases that function in endocytosis, membrane fusion, and vesicular trafficking events; the precise biological role and expression pattern of rab-18 are not yet known. | Paper_evidence | WBPaper00015788 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTPase activity. Predicted to be involved in intracellular protein transport and lipid droplet organization. Predicted to be located in Golgi apparatus. Human ortholog(s) of this gene implicated in Warburg micro syndrome 3. Is an ortholog of human RAB18 (RAB18, member RAS oncogene family). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110718 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14244) | ||||
| Molecular_info | Corresponding_CDS | Y92C3B.3a | |||||||
| Y92C3B.3b | |||||||||
| Corresponding_CDS_history | Y92C3B.3a:wp101 | ||||||||
| Corresponding_transcript | Y92C3B.3a.1 | ||||||||
| Y92C3B.3a.2 | |||||||||
| Y92C3B.3b.1 | |||||||||
| Y92C3B.3b.2 | |||||||||
| Other_sequence (82) | |||||||||
| Associated_feature | WBsf650835 | ||||||||
| WBsf981394 | |||||||||
| WBsf991220 | |||||||||
| WBsf226180 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00091946 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00065403 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083707 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083565 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083796 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058626 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083371 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083543 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00083602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061380 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019842 | ||||||||
| Expr1032115 | |||||||||
| Expr1162045 | |||||||||
| Expr2015217 | |||||||||
| Expr2033451 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | III | Position | -24.4278 | Error | 0.161517 | |||
| Positive | Positive_clone | Y92C3B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5497 | |||||||
| 5543 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
