WormBase Tree Display for Gene: WBGene00004133
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WBGene00004133 | SMap | S_parent | Sequence | F57B9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | abu-13 | Paper_evidence | WBPaper00038304 | |||
Person_evidence | WBPerson3 | ||||||
Sequence_name | F57B9.9 | ||||||
Molecular_name | F57B9.9 | ||||||
F57B9.9.1 | |||||||
CE51336 | |||||||
Other_name | pqn-46 | Person_evidence | WBPerson265 | ||||
CELE_F57B9.9 | Accession_evidence | NDB | BX284603 | ||||
Public_name | abu-13 | ||||||
DB_info | Database | AceView | gene | 3I32 | |||
WormQTL | gene | WBGene00004133 | |||||
WormFlux | gene | WBGene00004133 | |||||
NDB | locus_tag | CELE_F57B9.9 | |||||
NCBI | gene | 175970 | |||||
RefSeq | protein | NM_001322632.2 | |||||
TrEMBL | UniProtAcc | Q20936 | |||||
UniProt_GCRP | UniProtAcc | Q20936 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | abu | ||||||
Allele (50) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (27) | |||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in arc ant V; hypodermis; mechanosensory neurons; rectal epithelial cell; and somatic gonad precursor based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Ethanol; Nitric Oxide; and methylmercury hydroxide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00093382 | Inferred_automatically | RNAi_primary | |||
WBRNAi00093375 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015879 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005308 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048846 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093386 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1027048 | ||||||
Expr1032008 | |||||||
Expr1152595 | |||||||
Expr2009106 | |||||||
Expr2027342 | |||||||
Drives_construct | WBCnstr00037935 | ||||||
Construct_product | WBCnstr00037935 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (273) | |||||||
Interaction (185) | |||||||
WBProcess | WBbiopr:00000079 | ||||||
Map_info | Map | III | Position | -0.875479 | Error | 0.000392 | |
Positive | Positive_clone | F57B9 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038304 | ||||||
WBPaper00062388 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |