WormBase Tree Display for Gene: WBGene00004127

WBGene00004127 SMap: S_parent: Sequence: F52D1
  Identity: Version: 2
    Name: CGC_name: abu-12 Paper_evidence: WBPaper00038304
          Person_evidence: WBPerson3
      Sequence_name: F52D1.3
      Molecular_name: F52D1.3a
        F52D1.3a.1
        CE37115
        F52D1.3b
        CE51468
        F52D1.3c
        CE51512
        F52D1.3b.1
        F52D1.3c.1
      Other_name: pqn-40 Person_evidence: WBPerson265
        CELE_F52D1.3 Accession_evidence: NDB BX284606
      Public_name: abu-12
    DB_info: Database: AceView gene XB70
        WormQTL gene WBGene00004127
        WormFlux gene WBGene00004127
        NDB locus_tag CELE_F52D1.3
        NCBI gene 180399
        RefSeq protein NM_001380891.1
            NM_001380890.1
            NM_075703.5
        TrEMBL UniProtAcc A0A131MD32
            A0A131MC08
            O17351
        UniProt_GCRP UniProtAcc A0A131MC08
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 12 Apr 2011 11:48:32 WBPerson2970 Name_change: CGC_name: abu-12
                Other_name: pqn-40
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: abu
    Allele (109)
    RNASeq_FPKM (74)
    Ortholog (24)
    Structured_description: Concise_description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in anterior ganglion (ant); head mesodermal cell; hypodermis; interfacial epithelial cell; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F52D1.3a
      F52D1.3b
      F52D1.3c
    Corresponding_CDS_history: F52D1.3:wp128
    Corresponding_transcript: F52D1.3a.1
      F52D1.3b.1
      F52D1.3c.1
    Other_sequence: BF199494.1
      OVC01468_1
      JI180037.1
      JI167408.1
      SR02925
      AA618919.1
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00093376 Inferred_automatically: RNAi_primary
      WBRNAi00093385 Inferred_automatically: RNAi_primary
      WBRNAi00047960 Inferred_automatically: RNAi_primary
      WBRNAi00015393 Inferred_automatically: RNAi_primary
      WBRNAi00093381 Inferred_automatically: RNAi_primary
      WBRNAi00001824 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024698
      Expr1032002
      Expr1151779
      Expr2009105
      Expr2027341
    Drives_construct: WBCnstr00037937
    Construct_product: WBCnstr00037937
    Microarray_results (18)
    Expression_cluster (231)
    Interaction: WBInteraction000106222
      WBInteraction000112849
      WBInteraction000117457
      WBInteraction000122454
      WBInteraction000137764
      WBInteraction000139536
      WBInteraction000143651
      WBInteraction000144350
      WBInteraction000145317
      WBInteraction000145670
      WBInteraction000145742
      WBInteraction000146220
      WBInteraction000146626
      WBInteraction000147629
      WBInteraction000150471
      WBInteraction000150496
      WBInteraction000151781
      WBInteraction000152015
      WBInteraction000157390
      WBInteraction000159851
      WBInteraction000161254
      WBInteraction000161612
      WBInteraction000161994
      WBInteraction000163586
      WBInteraction000165348
      WBInteraction000171645
      WBInteraction000175050
      WBInteraction000175983
      WBInteraction000179242
      WBInteraction000180304
      WBInteraction000180596
      WBInteraction000182523
      WBInteraction000182642
      WBInteraction000184057
      WBInteraction000184116
      WBInteraction000184455
      WBInteraction000185126
      WBInteraction000185927
      WBInteraction000186002
      WBInteraction000190359
      WBInteraction000190411
      WBInteraction000194319
      WBInteraction000195140
      WBInteraction000196247
      WBInteraction000198330
      WBInteraction000199733
      WBInteraction000201686
      WBInteraction000201879
      WBInteraction000202074
      WBInteraction000205642
      WBInteraction000210523
      WBInteraction000210600
      WBInteraction000211303
      WBInteraction000214226
      WBInteraction000216517
      WBInteraction000217760
      WBInteraction000219318
      WBInteraction000219618
      WBInteraction000223490
      WBInteraction000227843
      WBInteraction000228909
      WBInteraction000229131
      WBInteraction000229419
      WBInteraction000232069
      WBInteraction000235411
      WBInteraction000235772
      WBInteraction000236174
      WBInteraction000236350
      WBInteraction000236726
      WBInteraction000236867
      WBInteraction000237050
      WBInteraction000237372
      WBInteraction000237392
      WBInteraction000238789
      WBInteraction000239042
      WBInteraction000241202
      WBInteraction000245277
      WBInteraction000246517
      WBInteraction000249240
      WBInteraction000250095
      WBInteraction000250703
      WBInteraction000251354
      WBInteraction000251757
      WBInteraction000252015
      WBInteraction000253263
      WBInteraction000263290
      WBInteraction000266160
      WBInteraction000267010
      WBInteraction000269770
      WBInteraction000270594
      WBInteraction000270932
      WBInteraction000272026
      WBInteraction000276663
      WBInteraction000280143
      WBInteraction000281035
      WBInteraction000286223
      WBInteraction000286450
      WBInteraction000288586
      WBInteraction000290342
      WBInteraction000291080
      WBInteraction000296729
      WBInteraction000297539
      WBInteraction000299012
      WBInteraction000305536
      WBInteraction000305948
      WBInteraction000306389
      WBInteraction000310368
      WBInteraction000313209
      WBInteraction000314062
      WBInteraction000314354
      WBInteraction000316654
      WBInteraction000320829
      WBInteraction000320960
      WBInteraction000321458
      WBInteraction000324542
      WBInteraction000327223
      WBInteraction000339448
      WBInteraction000340036
      WBInteraction000342924
      WBInteraction000344323
      WBInteraction000344843
      WBInteraction000352746
      WBInteraction000357636
      WBInteraction000364031
      WBInteraction000365049
      WBInteraction000373421
      WBInteraction000373451
      WBInteraction000377022
      WBInteraction000379263
      WBInteraction000379708
      WBInteraction000382938
      WBInteraction000385117
      WBInteraction000386430
      WBInteraction000393562
      WBInteraction000399390
      WBInteraction000400398
      WBInteraction000400934
      WBInteraction000403336
      WBInteraction000410204
      WBInteraction000410253
      WBInteraction000412192
      WBInteraction000421668
      WBInteraction000435883
      WBInteraction000437496
      WBInteraction000439432
      WBInteraction000442473
      WBInteraction000445043
      WBInteraction000445568
      WBInteraction000460816
      WBInteraction000461557
      WBInteraction000461694
      WBInteraction000504831
      WBInteraction000520627
    WBProcess: WBbiopr:00000079
  Map_info: Map: X Position: -19.8487
    Positive: Positive_clone: F52D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026926
    WBPaper00038304
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene