WormBase Tree Display for Gene: WBGene00004114
expand all nodes | collapse all nodes | view schema
WBGene00004114 | SMap | S_parent | Sequence | D1044 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pqn-25 | Person_evidence | WBPerson625 | |||||
Sequence_name | D1044.3 | ||||||||
Molecular_name | D1044.3 | ||||||||
D1044.3.1 | |||||||||
CE29743 | |||||||||
Other_name | CELE_D1044.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | pqn-25 | ||||||||
DB_info | Database | AceView | gene | 3G600 | |||||
WormQTL | gene | WBGene00004114 | |||||||
WormFlux | gene | WBGene00004114 | |||||||
NDB | locus_tag | CELE_D1044.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004114|UniProtKB=P41951 | |||||||
family | PTHR37157 | ||||||||
NCBI | gene | 175759 | |||||||
RefSeq | protein | NM_171123.6 | |||||||
SwissProt | UniProtAcc | P41951 | |||||||
TREEFAM | TREEFAM_ID | TF351707 | |||||||
UniProt_GCRP | UniProtAcc | P41951 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pqn | ||||||||
Allele (46) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00045578 | ||||||||
00045579 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00012942 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00017032 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015218 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be located in membrane. Expressed in intestine and pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D1044.3 | |||||||
Corresponding_CDS_history | D1044.3:wp88 | ||||||||
Corresponding_transcript | D1044.3.1 | ||||||||
Other_sequence | Acan_isotig08625 | ||||||||
Tcol_isotig16573 | |||||||||
EY470454.1 | |||||||||
FC539962.1 | |||||||||
EY470963.1 | |||||||||
CJC00793_1 | |||||||||
CBC03309_1 | |||||||||
ACC08464_1 | |||||||||
Associated_feature | WBsf992416 | ||||||||
WBsf992417 | |||||||||
WBsf1014898 | |||||||||
WBsf226688 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | III | Position | -1.60108 | Error | 0.011084 | |||
Positive | Positive_clone | D1044 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027258 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00041771 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |