WormBase Tree Display for Gene: WBGene00004099
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| WBGene00004099 | SMap | S_parent | Sequence | C03A7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | abu-15 | Paper_evidence | WBPaper00038304 | |||||
| Person_evidence | WBPerson3 | ||||||||
| Sequence_name | C03A7.4 | ||||||||
| Molecular_name | C03A7.4 | ||||||||
| C03A7.4.1 | |||||||||
| CE07862 | |||||||||
| Other_name | pqn-5 | Person_evidence | WBPerson265 | ||||||
| CELE_C03A7.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | abu-15 | ||||||||
| DB_info | Database | AceView | gene | 5F633 | |||||
| WormQTL | gene | WBGene00004099 | |||||||
| WormFlux | gene | WBGene00004099 | |||||||
| NDB | locus_tag | CELE_C03A7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004099|UniProtKB=O16500 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 182136 | |||||||
| RefSeq | protein | NM_071981.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315535 | |||||||
| TrEMBL | UniProtAcc | O16500 | |||||||
| UniProt_GCRP | UniProtAcc | O16500 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 12 Apr 2011 11:48:32 | WBPerson2970 | Name_change | CGC_name | abu-15 | ||||
| Other_name | pqn-5 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abu | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00037133 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028183 | ||||||||
| 00028184 | |||||||||
| Ortholog (20) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in endoplasmic reticulum unfolded protein response and pharynx development. Expressed in pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03A7.4 | |||||||
| Corresponding_transcript | C03A7.4.1 | ||||||||
| Associated_feature | WBsf999941 | ||||||||
| WBsf1019592 | |||||||||
| WBsf1019593 | |||||||||
| WBsf231734 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr12494 | ||||||||
| Expr1028993 | |||||||||
| Expr1143588 | |||||||||
| Expr2009108 | |||||||||
| Expr2027344 | |||||||||
| Drives_construct | WBCnstr00021223 | ||||||||
| WBCnstr00037942 | |||||||||
| Construct_product | WBCnstr00037942 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (196) | |||||||||
| Interaction (127) | |||||||||
| WBProcess | WBbiopr:00000046 | ||||||||
| WBbiopr:00000079 | |||||||||
| Map_info | Map | V | Position | -2.43732 | Error | 0.004959 | |||
| Positive | Positive_clone | C03A7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026929 | ||||||||
| WBPaper00032003 | |||||||||
| WBPaper00038304 | |||||||||
| WBPaper00040821 | |||||||||
| WBPaper00045541 | |||||||||
| WBPaper00045960 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
