WormBase Tree Display for Gene: WBGene00004096

WBGene00004096 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: CGC_name: pqm-1
      Sequence_name: F40F8.7
      Molecular_name: F40F8.7
        F40F8.7.1
        CE05846
      Other_name: pqm-132 Accession_evidence: EMBL AF008590
        CePqM132 Accession_evidence: EMBL AF008590
        CELE_F40F8.7 Accession_evidence: NDB BX284602
      Public_name: pqm-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqm
    Allele (63)
    Strain: WBStrain00031446
      WBStrain00051995
    RNASeq_FPKM (74)
    GO_annotation (36)
    Ortholog (25)
    Paralog: WBGene00008640 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: pqm-1 encodes a C2H2-type zinc finger and leucine zipper-containing protein that is upregulated in response to oxidative stress induced by paraquat treatment; PQM-1 may function as a stress-responsive transcription factor. Paper_evidence: WBPaper00003048
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable chromatin insulator sequence binding activity. Involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. Located in cytoplasm and nucleus. Expressed in head muscle; head neurons; intestinal cell; neurons; and pseudocoelom. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40F8.7
    Corresponding_transcript: F40F8.7.1
    Other_sequence (31)
    Associated_feature: WBsf655391
      WBsf717034
      WBsf978483
      WBsf981279
      WBsf989639
      WBsf989640
      WBsf989641
      WBsf223900
      WBsf223901
      WBsf223902
    Gene_product_binds (3503)
    Transcription_factor: WBTranscriptionFactor000022
  Experimental_info: RNAi_result (11)
    Expr_pattern (14)
    Drives_construct: WBCnstr00007738
      WBCnstr00011761
      WBCnstr00012696
      WBCnstr00012697
      WBCnstr00035700
      WBCnstr00042512
    Construct_product: WBCnstr00007738
      WBCnstr00016269
      WBCnstr00018902
      WBCnstr00035700
    Regulate_expr_cluster: WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
    Microarray_results (20)
    Expression_cluster (234)
    Interaction: WBInteraction000175575
      WBInteraction000192907
      WBInteraction000208285
      WBInteraction000228334
      WBInteraction000255160
      WBInteraction000265603
      WBInteraction000266728
      WBInteraction000274788
      WBInteraction000311454
      WBInteraction000322097
      WBInteraction000336991
      WBInteraction000344433
      WBInteraction000347488
      WBInteraction000364958
      WBInteraction000367794
      WBInteraction000380183
      WBInteraction000380310
      WBInteraction000393881
      WBInteraction000395191
      WBInteraction000404876
      WBInteraction000415332
      WBInteraction000415352
      WBInteraction000422151
      WBInteraction000434576
      WBInteraction000448462
      WBInteraction000452795
      WBInteraction000462600
      WBInteraction000505412
      WBInteraction000505469
      WBInteraction000505501
      WBInteraction000519879
      WBInteraction000520475
      WBInteraction000520476
      WBInteraction000527144
      WBInteraction000528024
      WBInteraction000528167
      WBInteraction000528218
      WBInteraction000528237
      WBInteraction000528341
      WBInteraction000528373
      WBInteraction000528574
      WBInteraction000528615
      WBInteraction000528635
      WBInteraction000528764
      WBInteraction000528821
      WBInteraction000529049
      WBInteraction000529190
      WBInteraction000529207
      WBInteraction000529411
      WBInteraction000529500
      WBInteraction000529518
      WBInteraction000529529
      WBInteraction000529622
      WBInteraction000529788
      WBInteraction000529801
      WBInteraction000529854
      WBInteraction000529942
      WBInteraction000529989
      WBInteraction000530052
      WBInteraction000530231
      WBInteraction000530250
      WBInteraction000530305
      WBInteraction000530334
      WBInteraction000530461
      WBInteraction000530548
      WBInteraction000530741
      WBInteraction000530901
      WBInteraction000530926
      WBInteraction000531031
      WBInteraction000531097
      WBInteraction000531133
      WBInteraction000531240
      WBInteraction000531311
      WBInteraction000531331
      WBInteraction000531435
      WBInteraction000531453
      WBInteraction000531489
      WBInteraction000531523
      WBInteraction000531547
      WBInteraction000531590
      WBInteraction000531647
      WBInteraction000531712
      WBInteraction000531777
      WBInteraction000531844
      WBInteraction000531890
      WBInteraction000531970
      WBInteraction000531996
      WBInteraction000532088
      WBInteraction000532168
      WBInteraction000532240
      WBInteraction000532276
      WBInteraction000532290
      WBInteraction000532308
      WBInteraction000532333
      WBInteraction000532505
      WBInteraction000532537
      WBInteraction000532636
      WBInteraction000532811
      WBInteraction000533372
      WBInteraction000533447
      WBInteraction000533699
      WBInteraction000533707
      WBInteraction000533856
      WBInteraction000533912
      WBInteraction000533940
      WBInteraction000534138
      WBInteraction000534148
      WBInteraction000534160
      WBInteraction000534192
      WBInteraction000534407
      WBInteraction000534510
      WBInteraction000535178
      WBInteraction000535325
      WBInteraction000535326
      WBInteraction000535327
      WBInteraction000535328
      WBInteraction000535329
      WBInteraction000535330
      WBInteraction000535331
      WBInteraction000535332
      WBInteraction000535333
      WBInteraction000535334
      WBInteraction000535335
      WBInteraction000535336
      WBInteraction000535337
      WBInteraction000535338
      WBInteraction000535339
      WBInteraction000535340
      WBInteraction000535341
      WBInteraction000535342
      WBInteraction000542656
      WBInteraction000542659
      WBInteraction000560391
      WBInteraction000560392
  Map_info: Map: II Position: 3.32897 Error: 0.002086
    Positive: Positive_clone: F40F8 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4599
    Pseudo_map_position
  Reference (51)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene