WormBase Tree Display for Gene: WBGene00004027

WBGene00004027 SMap: S_parent: Sequence: Y49E10
  Identity: Version: 1
    Name (5)
    DB_info: Database: AceView gene 3N517
        WormQTL gene WBGene00004027
        WormFlux gene WBGene00004027
        NDB locus_tag CELE_Y49E10.14
        Panther gene CAEEL|WormBase=WBGene00004027|UniProtKB=Q94131
          family PTHR12547
        NCBI gene 176667
        RefSeq protein NM_001268238.3
            NM_001268237.2
        SwissProt UniProtAcc Q94131
        TREEFAM TREEFAM_ID TF318914
        UniProt_GCRP UniProtAcc Q94131
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pie
    Allele (78)
    Legacy_information: [C.elegansII] zu154 : maternal effect lethal, often with two distinct pharynges; additional pharynx and intestinal tissue from P2 (transformed to EMS fate).OA1. Cloned: encodes zinc finger protein, localized to nuclei of germ line blastomeres. [Mello et al. 1992; Mango et al. 1994; EU; JJ]
    Strain (76)
    RNASeq_FPKM (74)
    GO_annotation (33)
    Ortholog (26)
    Paralog (20)
    Structured_description: Concise_description: pie-1 encodes a C-x8-C-x5-C-x3-H-type zinc-finger protein; maternally provided PIE-1 is essential for germline cell fate determination, as it functions as a repressor of RNA polymerase II-dependent gene expression in the developing germ line; PIE-1 localization, initially uniform and then concentrated in the posterior germ cell lineages, is regulated by other maternally supplied gene products including PAR-1, MEX-5, and MEX-6. Paper_evidence: WBPaper00004304
            WBPaper00004631
            WBPaper00005297
            WBPaper00005347
            WBPaper00005605
            WBPaper00005735
            WBPaper00005791
          Curator_confirmed: WBPerson1843
          Date_last_updated: 30 Nov 2004 00:00:00
      Automated_description: Predicted to enable mRNA 3'-UTR binding activity. Involved in several processes, including embryonic pattern specification; formation of primary germ layer; and negative regulation of nitrogen compound metabolic process. Located in several cellular components, including P granule; centrosome; and cytosol. Expressed in germ line; head muscle; and nerve ring. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y49E10.14a
      Y49E10.14b
    Corresponding_CDS_history: Y49E10.14:wp52
    Corresponding_transcript: Y49E10.14a.1
      Y49E10.14b.1
    Other_sequence: U62896
      CBC08706_1
      CRC03076_1
    Associated_feature: WBsf047506
      WBsf645660
      WBsf659608
      WBsf976032
      WBsf976033
      WBsf976034
      WBsf978688
      WBsf994644
      WBsf225904
    Transcription_factor: WBTranscriptionFactor000460
  Experimental_info: RNAi_result (65)
    Expr_pattern (17)
    Drives_construct (720)
    Construct_product (18)
    Regulate_expr_cluster: WBPaper00061478:pie-1(ne4303)_upregulated
      WBPaper00061478:pie-1(ne4433)_upregulated
    Antibody: WBAntibody00000118
      WBAntibody00000189
      WBAntibody00000697
      WBAntibody00001076
      WBAntibody00001395
      WBAntibody00001588
      WBAntibody00001589
    Microarray_results (24)
    Expression_cluster (152)
    Interaction: WBInteraction000003117
      WBInteraction000003207
      WBInteraction000003209
      WBInteraction000003398
      WBInteraction000006563
      WBInteraction000006586
      WBInteraction000006646
      WBInteraction000006655
      WBInteraction000007026
      WBInteraction000028265
      WBInteraction000029085
      WBInteraction000031496
      WBInteraction000031497
      WBInteraction000031510
      WBInteraction000032164
      WBInteraction000043502
      WBInteraction000050898
      WBInteraction000052024
      WBInteraction000052031
      WBInteraction000052811
      WBInteraction000126247
      WBInteraction000126270
      WBInteraction000126497
      WBInteraction000134293
      WBInteraction000135158
      WBInteraction000160400
      WBInteraction000165190
      WBInteraction000166174
      WBInteraction000166175
      WBInteraction000166176
      WBInteraction000166180
      WBInteraction000175074
      WBInteraction000190813
      WBInteraction000206784
      WBInteraction000212205
      WBInteraction000219989
      WBInteraction000220983
      WBInteraction000225491
      WBInteraction000225768
      WBInteraction000227309
      WBInteraction000227310
      WBInteraction000227311
      WBInteraction000227312
      WBInteraction000227313
      WBInteraction000228951
      WBInteraction000235885
      WBInteraction000236511
      WBInteraction000237468
      WBInteraction000245463
      WBInteraction000252816
      WBInteraction000254439
      WBInteraction000259466
      WBInteraction000262501
      WBInteraction000262502
      WBInteraction000263468
      WBInteraction000267254
      WBInteraction000271477
      WBInteraction000271967
      WBInteraction000271993
      WBInteraction000272861
      WBInteraction000275324
      WBInteraction000277508
      WBInteraction000280117
      WBInteraction000283035
      WBInteraction000286237
      WBInteraction000287149
      WBInteraction000289903
      WBInteraction000293632
      WBInteraction000295292
      WBInteraction000301253
      WBInteraction000301734
      WBInteraction000303409
      WBInteraction000304036
      WBInteraction000306979
      WBInteraction000307491
      WBInteraction000310407
      WBInteraction000313413
      WBInteraction000314885
      WBInteraction000314889
      WBInteraction000318942
      WBInteraction000322374
      WBInteraction000322643
      WBInteraction000323796
      WBInteraction000323831
      WBInteraction000326192
      WBInteraction000327136
      WBInteraction000327207
      WBInteraction000329364
      WBInteraction000329702
      WBInteraction000333906
      WBInteraction000336748
      WBInteraction000343632
      WBInteraction000348679
      WBInteraction000348848
      WBInteraction000351080
      WBInteraction000351562
      WBInteraction000352960
      WBInteraction000354259
      WBInteraction000355168
      WBInteraction000355528
      WBInteraction000357025
      WBInteraction000357530
      WBInteraction000363545
      WBInteraction000365980
      WBInteraction000367423
      WBInteraction000372090
      WBInteraction000372290
      WBInteraction000372488
      WBInteraction000373340
      WBInteraction000374091
      WBInteraction000375506
      WBInteraction000377500
      WBInteraction000379093
      WBInteraction000383395
      WBInteraction000383396
      WBInteraction000386854
      WBInteraction000389529
      WBInteraction000391389
      WBInteraction000392223
      WBInteraction000393463
      WBInteraction000395133
      WBInteraction000395141
      WBInteraction000395811
      WBInteraction000397789
      WBInteraction000398100
      WBInteraction000400455
      WBInteraction000404756
      WBInteraction000405353
      WBInteraction000408481
      WBInteraction000410089
      WBInteraction000414933
      WBInteraction000415309
      WBInteraction000420487
      WBInteraction000425563
      WBInteraction000425891
      WBInteraction000425904
      WBInteraction000426502
      WBInteraction000427441
      WBInteraction000435531
      WBInteraction000440908
      WBInteraction000447975
      WBInteraction000448879
      WBInteraction000448907
      WBInteraction000451020
      WBInteraction000453933
      WBInteraction000455535
      WBInteraction000456754
      WBInteraction000459905
      WBInteraction000460268
      WBInteraction000462157
      WBInteraction000469378
      WBInteraction000471094
      WBInteraction000501443
      WBInteraction000501444
      WBInteraction000501461
      WBInteraction000501462
      WBInteraction000501485
      WBInteraction000501692
      WBInteraction000501843
      WBInteraction000501908
      WBInteraction000502150
      WBInteraction000502270
      WBInteraction000502365
      WBInteraction000502656
      WBInteraction000502666
      WBInteraction000502794
      WBInteraction000503833
      WBInteraction000503994
      WBInteraction000504500
      WBInteraction000504694
      WBInteraction000505318
      WBInteraction000505379
      WBInteraction000505426
      WBInteraction000505565
      WBInteraction000505607
      WBInteraction000505621
      WBInteraction000506582
      WBInteraction000506583
      WBInteraction000517737
      WBInteraction000517738
      WBInteraction000517739
      WBInteraction000519255
      WBInteraction000520747
      WBInteraction000522370
      WBInteraction000522371
      WBInteraction000522372
      WBInteraction000522374
      WBInteraction000524133
      WBInteraction000527126
      WBInteraction000527127
      WBInteraction000527128
      WBInteraction000527129
      WBInteraction000527130
      WBInteraction000527131
      WBInteraction000527132
      WBInteraction000527133
      WBInteraction000527134
      WBInteraction000527135
      WBInteraction000527136
      WBInteraction000527137
      WBInteraction000530318
      WBInteraction000532524
      WBInteraction000532647
      WBInteraction000533254
      WBInteraction000534285
      WBInteraction000534307
      WBInteraction000534468
      WBInteraction000534509
      WBInteraction000534528
      WBInteraction000535121
      WBInteraction000538924
      WBInteraction000538925
      WBInteraction000538926
      WBInteraction000538927
      WBInteraction000538928
      WBInteraction000538929
      WBInteraction000538930
      WBInteraction000538931
      WBInteraction000538932
      WBInteraction000538933
      WBInteraction000538934
      WBInteraction000538935
      WBInteraction000538936
      WBInteraction000538937
      WBInteraction000538938
      WBInteraction000538939
      WBInteraction000538940
      WBInteraction000538941
      WBInteraction000538942
      WBInteraction000538943
      WBInteraction000538944
      WBInteraction000538945
      WBInteraction000538946
      WBInteraction000541417
      WBInteraction000541575
      WBInteraction000541623
      WBInteraction000541624
      WBInteraction000541625
      WBInteraction000542776
      WBInteraction000547291
      WBInteraction000547401
      WBInteraction000547681
      WBInteraction000547721
      WBInteraction000548348
      WBInteraction000548700
      WBInteraction000548711
      WBInteraction000548716
      WBInteraction000548766
      WBInteraction000548781
      WBInteraction000548816
      WBInteraction000548817
      WBInteraction000549268
      WBInteraction000550461
      WBInteraction000550512
      WBInteraction000550514
      WBInteraction000550554
      WBInteraction000550558
      WBInteraction000550589
      WBInteraction000550591
      WBInteraction000550592
      WBInteraction000550593
      WBInteraction000550594
      WBInteraction000550651
      WBInteraction000550656
      WBInteraction000556155
      WBInteraction000556156
      WBInteraction000556161
      WBInteraction000556162
      WBInteraction000556164
      WBInteraction000556165
      WBInteraction000556166
      WBInteraction000556167
      WBInteraction000556168
      WBInteraction000556169
      WBInteraction000556187
      WBInteraction000556540
      WBInteraction000556977
      WBInteraction000556979
      WBInteraction000557006
      WBInteraction000557007
      WBInteraction000557008
      WBInteraction000557009
      WBInteraction000557010
      WBInteraction000557721
      WBInteraction000557722
      WBInteraction000558165
      WBInteraction000558169
      WBInteraction000558170
      WBInteraction000558174
      WBInteraction000558175
      WBInteraction000558176
      WBInteraction000558177
      WBInteraction000558178
      WBInteraction000558240
      WBInteraction000559625
      WBInteraction000570469
      WBInteraction000573305
      WBInteraction000573311
      WBInteraction000573312
      WBInteraction000573313
      WBInteraction000573314
      WBInteraction000573315
      WBInteraction000573316
      WBInteraction000573317
      WBInteraction000573318
      WBInteraction000573319
      WBInteraction000573320
      WBInteraction000573321
      WBInteraction000582450
    WBProcess: WBbiopr:00000017
  Map_info: Map: III Position: 17.7453 Error: 0.045821
    Well_ordered
    Positive: Inside_rearr: ctDf3
      Positive_clone: pJP604
        Y49E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point (11)
      Pos_neg_data: 8413
        8414
        8548
        8557
    Landmark_gene
  Reference (314)
  Method: Gene