WormBase Tree Display for Gene: WBGene00004024
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| WBGene00004024 | SMap | S_parent | Sequence | Y75B8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | php-3 | Paper_evidence | WBPaper00038232 | |||||
| Person_evidence | WBPerson698 | ||||||||
| Sequence_name | Y75B8A.1 | ||||||||
| Molecular_name | Y75B8A.1 | ||||||||
| Y75B8A.1.1 | |||||||||
| CE28148 | |||||||||
| Other_name | lep-3 | ||||||||
| CELE_Y75B8A.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | php-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 04 Oct 2011 09:46:55 | WBPerson2970 | Event | Acquires_merge | WBGene00044613 | ||||
| Name_change | Other_name | lep-3 | |||||||
| Acquires_merge | WBGene00044613 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | php | ||||||||
| Allele (69) | |||||||||
| Strain | WBStrain00031707 | ||||||||
| WBStrain00033872 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103253 | ||||||||
| 00103254 | |||||||||
| 00103255 | |||||||||
| 00103256 | |||||||||
| 00103257 | |||||||||
| 00103258 | |||||||||
| 00103259 | |||||||||
| 00103260 | |||||||||
| 00103261 | |||||||||
| 00112196 | |||||||||
| Ortholog (53) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of nematode male tail tip morphogenesis. Predicted to be located in nucleus. Expressed in several structures, including coelomocyte; head neurons; intestine; somatic nervous system; and tail neurons. Human ortholog(s) of this gene implicated in congenital vertical talus. Is an ortholog of human HOXC10 (homeobox C10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111568 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5133) | ||||
| Molecular_info | Corresponding_CDS | Y75B8A.1 | |||||||
| Corresponding_CDS_history | Y75B8A.1:wp52 | ||||||||
| Corresponding_transcript | Y75B8A.1.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf978291 | ||||||||
| WBsf994567 | |||||||||
| WBsf227631 | |||||||||
| Transcription_factor | WBTranscriptionFactor000580 | ||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr7743 | ||||||||
| Expr11064 | |||||||||
| Expr12544 | |||||||||
| Expr15637 | |||||||||
| Expr16260 | |||||||||
| Expr1025140 | |||||||||
| Expr1031926 | |||||||||
| Expr1161855 | |||||||||
| Expr2014913 | |||||||||
| Expr2033149 | |||||||||
| Drives_construct | WBCnstr00012888 | ||||||||
| WBCnstr00018143 | |||||||||
| WBCnstr00021487 | |||||||||
| Construct_product | WBCnstr00008153 | ||||||||
| WBCnstr00018143 | |||||||||
| WBCnstr00021487 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (154) | |||||||||
| Map_info | Map | III | Position | 14.697 | Error | 0.004079 | |||
| Positive | Positive_clone | Y75B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (33) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
