WormBase Tree Display for Gene: WBGene00004024

WBGene00004024 SMap: S_parent: Sequence: Y75B8A
  Identity: Version: 2
    Name: CGC_name: php-3 Paper_evidence: WBPaper00038232
          Person_evidence: WBPerson698
      Sequence_name: Y75B8A.1
      Molecular_name: Y75B8A.1
        Y75B8A.1.1
        CE28148
      Other_name: lep-3
        CELE_Y75B8A.1 Accession_evidence: NDB BX284603
      Public_name: php-3
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 04 Oct 2011 09:46:55 WBPerson2970 Event: Acquires_merge: WBGene00044613
              Name_change: Other_name: lep-3
      Acquires_merge: WBGene00044613
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: php
    Allele (69)
    Strain: WBStrain00031707
      WBStrain00033872
    RNASeq_FPKM (74)
    GO_annotation: 00103253
      00103254
      00103255
      00103256
      00103257
      00103258
      00103259
      00103260
      00103261
      00112196
    Ortholog (53)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of nematode male tail tip morphogenesis. Predicted to be located in nucleus. Expressed in several structures, including coelomocyte; head neurons; intestine; somatic nervous system; and tail neurons. Human ortholog(s) of this gene implicated in congenital vertical talus. Is an ortholog of human HOXC10 (homeobox C10). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111568 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5133)
  Molecular_info: Corresponding_CDS: Y75B8A.1
    Corresponding_CDS_history: Y75B8A.1:wp52
    Corresponding_transcript: Y75B8A.1.1
    Other_sequence (14)
    Associated_feature: WBsf978291
      WBsf994567
      WBsf227631
    Transcription_factor: WBTranscriptionFactor000580
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr7743
      Expr11064
      Expr12544
      Expr15637
      Expr16260
      Expr1025140
      Expr1031926
      Expr1161855
      Expr2014913
      Expr2033149
    Drives_construct: WBCnstr00012888
      WBCnstr00018143
      WBCnstr00021487
    Construct_product: WBCnstr00008153
      WBCnstr00018143
      WBCnstr00021487
    Microarray_results (18)
    Expression_cluster (97)
    Interaction: WBInteraction000001053
      WBInteraction000009812
      WBInteraction000028313
      WBInteraction000028584
      WBInteraction000028966
      WBInteraction000029369
      WBInteraction000029718
      WBInteraction000029719
      WBInteraction000030807
      WBInteraction000031446
      WBInteraction000031459
      WBInteraction000031506
      WBInteraction000031507
      WBInteraction000031508
      WBInteraction000031509
      WBInteraction000032588
      WBInteraction000033124
      WBInteraction000040404
      WBInteraction000040407
      WBInteraction000040409
      WBInteraction000040411
      WBInteraction000040416
      WBInteraction000040417
      WBInteraction000040418
      WBInteraction000042542
      WBInteraction000043559
      WBInteraction000044369
      WBInteraction000044822
      WBInteraction000044837
      WBInteraction000044838
      WBInteraction000046787
      WBInteraction000047271
      WBInteraction000048574
      WBInteraction000048612
      WBInteraction000050015
      WBInteraction000050085
      WBInteraction000050201
      WBInteraction000050204
      WBInteraction000050205
      WBInteraction000111000
      WBInteraction000115586
      WBInteraction000122577
      WBInteraction000122811
      WBInteraction000126585
      WBInteraction000135500
      WBInteraction000135624
      WBInteraction000157326
      WBInteraction000159801
      WBInteraction000162451
      WBInteraction000167256
      WBInteraction000175526
      WBInteraction000187412
      WBInteraction000195402
      WBInteraction000272803
      WBInteraction000361732
      WBInteraction000387719
      WBInteraction000387743
      WBInteraction000387872
      WBInteraction000387889
      WBInteraction000387901
      WBInteraction000387926
      WBInteraction000387928
      WBInteraction000388044
      WBInteraction000388055
      WBInteraction000388124
      WBInteraction000388150
      WBInteraction000388195
      WBInteraction000435037
      WBInteraction000440978
      WBInteraction000505252
      WBInteraction000505429
      WBInteraction000505549
      WBInteraction000505608
      WBInteraction000505622
      WBInteraction000509769
      WBInteraction000509958
      WBInteraction000511553
      WBInteraction000512257
      WBInteraction000512262
      WBInteraction000513311
      WBInteraction000513490
      WBInteraction000513746
      WBInteraction000515487
      WBInteraction000516332
      WBInteraction000527114
      WBInteraction000527115
      WBInteraction000527116
      WBInteraction000527117
      WBInteraction000527118
      WBInteraction000527119
      WBInteraction000527120
      WBInteraction000527121
      WBInteraction000527122
      WBInteraction000527123
      WBInteraction000527124
      WBInteraction000527125
      WBInteraction000528297
      WBInteraction000528358
      WBInteraction000528497
      WBInteraction000528600
      WBInteraction000528640
      WBInteraction000528781
      WBInteraction000528886
      WBInteraction000528966
      WBInteraction000529039
      WBInteraction000529384
      WBInteraction000529559
      WBInteraction000529581
      WBInteraction000529633
      WBInteraction000529733
      WBInteraction000530182
      WBInteraction000530361
      WBInteraction000530429
      WBInteraction000530626
      WBInteraction000530916
      WBInteraction000530929
      WBInteraction000531002
      WBInteraction000531176
      WBInteraction000531325
      WBInteraction000531383
      WBInteraction000531415
      WBInteraction000531468
      WBInteraction000531508
      WBInteraction000531750
      WBInteraction000531907
      WBInteraction000532147
      WBInteraction000532165
      WBInteraction000532392
      WBInteraction000532527
      WBInteraction000533024
      WBInteraction000533262
      WBInteraction000533282
      WBInteraction000533718
      WBInteraction000533836
      WBInteraction000533928
      WBInteraction000533998
      WBInteraction000534137
      WBInteraction000534191
      WBInteraction000534212
      WBInteraction000534332
      WBInteraction000534424
      WBInteraction000534455
      WBInteraction000534484
      WBInteraction000534553
      WBInteraction000534622
      WBInteraction000534672
      WBInteraction000535120
      WBInteraction000535318
      WBInteraction000541108
      WBInteraction000541110
      WBInteraction000541126
      WBInteraction000541129
      WBInteraction000541131
      WBInteraction000541135
  Map_info: Map: III Position: 14.697 Error: 0.004079
    Positive: Positive_clone: Y75B8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (33)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene