WormBase Tree Display for Gene: WBGene00004020
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| WBGene00004020 | SMap | S_parent | Sequence | EGAP2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pho-1 | Person_evidence | WBPerson411 | |||||
| Sequence_name | EGAP2.3 | ||||||||
| Molecular_name | EGAP2.3 | ||||||||
| EGAP2.3.1 | |||||||||
| CE04325 | |||||||||
| Other_name | CELE_EGAP2.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pho-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pho | ||||||||
| Allele (44) | |||||||||
| Legacy_information (2) | |||||||||
| Strain | WBStrain00022680 | ||||||||
| WBStrain00022679 | |||||||||
| WBStrain00022681 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063393 | ||||||||
| 00063394 | |||||||||
| 00063395 | |||||||||
| 00063396 | |||||||||
| 00063397 | |||||||||
| 00063398 | |||||||||
| 00063399 | |||||||||
| 00063400 | |||||||||
| Ortholog (27) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Concise_description | pho-1 encodes the major C. elegans intestinal acid phosphatase; PHO-1 may function redundantly with other acid phosphatases; PHO-1 intestinal expression appears to be positively regulated by CKI-1, a cyclin-dependent kinase inhibitor, and negatively regulated by POP-1, a TCF/LEF transcription factor; PHO-1 is expressed along the intestinal brush border in all gut cells except the most anterior int-1 and int-2 cells, beginning at the three-fold stage of embryogenesis. | Paper_evidence | WBPaper00001454 | |||||
| WBPaper00005295 | |||||||||
| WBPaper00017091 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 27 Mar 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable phosphatase activity. Predicted to be involved in dephosphorylation. Located in membrane raft. Expressed in intestine. Used to study obesity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:9970 | Homo sapiens | Paper_evidence | WBPaper00061889 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 28 Jun 2022 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00001252 | ||||||||
| Molecular_info | Corresponding_CDS | EGAP2.3 | |||||||
| Corresponding_transcript | EGAP2.3.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf650050 | ||||||||
| WBsf650051 | |||||||||
| WBsf665523 | |||||||||
| WBsf982352 | |||||||||
| WBsf982353 | |||||||||
| WBsf223018 | |||||||||
| WBsf223019 | |||||||||
| WBsf223020 | |||||||||
| WBsf223021 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr3212 | ||||||||
| Expr1027207 | |||||||||
| Expr1031925 | |||||||||
| Expr1147694 | |||||||||
| Expr2014906 | |||||||||
| Expr2033142 | |||||||||
| Drives_construct | WBCnstr00000345 | ||||||||
| WBCnstr00035738 | |||||||||
| Construct_product | WBCnstr00035738 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (259) | |||||||||
| Interaction (67) | |||||||||
| Map_info | Map | II | Position | -1.84291 | Error | 0.018889 | |||
| Positive | Positive_clone | EGAP2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | 2_point | 7072 | |||||||
| 7073 | |||||||||
| 7074 | |||||||||
| Multi_point | 3635 | ||||||||
| 3636 | |||||||||
| 5004 | |||||||||
| 5035 | |||||||||
| Reference (19) | |||||||||
| Remark | Data extracted from Beh et al. (1991) | ||||||||
| Sequence connection from [McGhee JD] | |||||||||
| Method | Gene |
