WormBase Tree Display for Gene: WBGene00003925

WBGene00003925 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C36B1
  Identity: Version: 1
    Name: CGC_name: pas-4 Person_evidence: WBPerson1551
      Sequence_name: C36B1.4
      Molecular_name: C36B1.4
        C36B1.4.1
        CE05371
      Other_name: CELE_C36B1.4 Accession_evidence: NDB BX284601
      Public_name: pas-4
    DB_info: Database: AceView gene 1J304
        WormQTL gene WBGene00003925
        WormFlux gene WBGene00003925
        NDB locus_tag CELE_C36B1.4
        Panther gene CAEEL|WormBase=WBGene00003925|UniProtKB=Q95005
          family PTHR11599
        NCBI gene 172679
        RefSeq protein NM_059959.7
        SwissProt UniProtAcc Q95005
        TREEFAM TREEFAM_ID TF106212
        UniProt_GCRP UniProtAcc Q95005
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pas
    Allele (17)
    Strain: WBStrain00002987
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (43)
    Paralog (13)
    Structured_description: Concise_description: pas-4 encodes a proteasome alpha-type seven subunit of the core 20S proteasome subcomplex; loss of pas-4 activity via RNAi results in a wide variety of defects including embryonic and larval lethality, sterility, abnormal locomotion, slow growth, and abnormal transgene expression and subcellular localization; loss of pas-4 activity also results in activation of SKN-1, a transcription factor required in adult worms for the acute response to oxidative stress and maternally for embryonic development. Paper_evidence: WBPaper00004402
            WBPaper00006395
            WBPaper00006510
            WBPaper00024497
            WBPaper00025054
            WBPaper00028383
            WBPaper00030965
          Curator_confirmed: WBPerson1843
          Date_last_updated: 18 Jan 2008 00:00:00
      Automated_description: Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in nucleus. Predicted to be part of proteasome core complex, alpha-subunit complex. Expressed in tail. Is an ortholog of human PSMA7 (proteasome 20S subunit alpha 7) and PSMA8 (proteasome 20S subunit alpha 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C36B1.4
    Corresponding_transcript: C36B1.4.1
    Other_sequence (94)
    Associated_feature: WBsf649413
      WBsf984491
      WBsf1010268
      WBsf219969
      WBsf219970
  Experimental_info: RNAi_result (25)
    Expr_pattern: Chronogram1931
      Chronogram1944
      Expr5441
      Expr1010437
      Expr1031858
      Expr1146036
      Expr2014743
      Expr2032977
    Drives_construct: WBCnstr00003489
      WBCnstr00035793
    Construct_product: WBCnstr00035793
    Microarray_results (23)
    Expression_cluster (168)
    Interaction: WBInteraction000034261
      WBInteraction000035023
      WBInteraction000035074
      WBInteraction000035075
      WBInteraction000035076
      WBInteraction000035274
      WBInteraction000036569
      WBInteraction000037002
      WBInteraction000037074
      WBInteraction000037150
      WBInteraction000037429
      WBInteraction000037430
      WBInteraction000037971
      WBInteraction000038497
      WBInteraction000038520
      WBInteraction000038521
      WBInteraction000038522
      WBInteraction000039631
      WBInteraction000039922
      WBInteraction000039933
      WBInteraction000039934
      WBInteraction000039935
      WBInteraction000040051
      WBInteraction000040748
      WBInteraction000040749
      WBInteraction000040750
      WBInteraction000040751
      WBInteraction000040752
      WBInteraction000040753
      WBInteraction000040754
      WBInteraction000040755
      WBInteraction000040756
      WBInteraction000040757
      WBInteraction000040758
      WBInteraction000041629
      WBInteraction000041630
      WBInteraction000041631
      WBInteraction000041632
      WBInteraction000041633
      WBInteraction000041634
      WBInteraction000041635
      WBInteraction000041636
      WBInteraction000041637
      WBInteraction000041638
      WBInteraction000041639
      WBInteraction000041711
      WBInteraction000041856
      WBInteraction000042072
      WBInteraction000043607
      WBInteraction000043833
      WBInteraction000043834
      WBInteraction000043835
      WBInteraction000043836
      WBInteraction000043837
      WBInteraction000043838
      WBInteraction000043839
      WBInteraction000043840
      WBInteraction000043841
      WBInteraction000043842
      WBInteraction000046563
      WBInteraction000046595
      WBInteraction000047384
      WBInteraction000048035
      WBInteraction000048990
      WBInteraction000048992
      WBInteraction000049976
      WBInteraction000050055
      WBInteraction000050243
      WBInteraction000050269
      WBInteraction000050270
      WBInteraction000101684
      WBInteraction000101972
      WBInteraction000101996
      WBInteraction000102690
      WBInteraction000102848
      WBInteraction000103084
      WBInteraction000104463
      WBInteraction000104621
      WBInteraction000104874
      WBInteraction000105368
      WBInteraction000105634
      WBInteraction000105964
      WBInteraction000105981
      WBInteraction000106309
      WBInteraction000107319
      WBInteraction000108792
      WBInteraction000109069
      WBInteraction000110135
      WBInteraction000111204
      WBInteraction000111321
      WBInteraction000111367
      WBInteraction000111459
      WBInteraction000111460
      WBInteraction000111461
      WBInteraction000111462
      WBInteraction000111463
      WBInteraction000111464
      WBInteraction000111465
      WBInteraction000111466
      WBInteraction000111467
      WBInteraction000111543
      WBInteraction000111557
      WBInteraction000111600
      WBInteraction000112517
      WBInteraction000119014
      WBInteraction000125099
      WBInteraction000126951
      WBInteraction000126955
      WBInteraction000139022
      WBInteraction000152732
      WBInteraction000153267
      WBInteraction000153268
      WBInteraction000154285
      WBInteraction000154286
      WBInteraction000154287
      WBInteraction000154288
      WBInteraction000156896
      WBInteraction000156897
      WBInteraction000157802
      WBInteraction000161586
      WBInteraction000163435
      WBInteraction000164919
      WBInteraction000167425
      WBInteraction000168330
      WBInteraction000171039
      WBInteraction000174868
      WBInteraction000176691
      WBInteraction000178607
      WBInteraction000178608
      WBInteraction000178784
      WBInteraction000179082
      WBInteraction000179332
      WBInteraction000179715
      WBInteraction000182277
      WBInteraction000183530
      WBInteraction000185054
      WBInteraction000185684
      WBInteraction000186160
      WBInteraction000188798
      WBInteraction000190592
      WBInteraction000191221
      WBInteraction000191941
      WBInteraction000196662
      WBInteraction000202625
      WBInteraction000202967
      WBInteraction000203287
      WBInteraction000203372
      WBInteraction000205304
      WBInteraction000208178
      WBInteraction000213597
      WBInteraction000213853
      WBInteraction000215232
      WBInteraction000218026
      WBInteraction000218027
      WBInteraction000218028
      WBInteraction000218029
      WBInteraction000218030
      WBInteraction000218031
      WBInteraction000229246
      WBInteraction000234374
      WBInteraction000237732
      WBInteraction000239511
      WBInteraction000239517
      WBInteraction000240288
      WBInteraction000241161
      WBInteraction000241940
      WBInteraction000246308
      WBInteraction000249355
      WBInteraction000251797
      WBInteraction000252861
      WBInteraction000263437
      WBInteraction000264124
      WBInteraction000267701
      WBInteraction000271849
      WBInteraction000272426
      WBInteraction000274953
      WBInteraction000276870
      WBInteraction000277382
      WBInteraction000281226
      WBInteraction000293669
      WBInteraction000294360
      WBInteraction000295191
      WBInteraction000295323
      WBInteraction000302341
      WBInteraction000302820
      WBInteraction000303113
      WBInteraction000303949
      WBInteraction000305764
      WBInteraction000305777
      WBInteraction000307965
      WBInteraction000310073
      WBInteraction000310516
      WBInteraction000312016
      WBInteraction000315901
      WBInteraction000316564
      WBInteraction000319516
      WBInteraction000321614
      WBInteraction000322220
      WBInteraction000323147
      WBInteraction000323334
      WBInteraction000326179
      WBInteraction000333635
      WBInteraction000342038
      WBInteraction000342259
      WBInteraction000350290
      WBInteraction000351921
      WBInteraction000355507
      WBInteraction000357524
      WBInteraction000358543
      WBInteraction000358812
      WBInteraction000369835
      WBInteraction000371811
      WBInteraction000374837
      WBInteraction000375398
      WBInteraction000380744
      WBInteraction000381091
      WBInteraction000387028
      WBInteraction000387112
      WBInteraction000389253
      WBInteraction000390882
      WBInteraction000392977
      WBInteraction000395301
      WBInteraction000396066
      WBInteraction000401426
      WBInteraction000403423
      WBInteraction000407704
      WBInteraction000416951
      WBInteraction000417659
      WBInteraction000419675
      WBInteraction000419790
      WBInteraction000422548
      WBInteraction000425142
      WBInteraction000426205
      WBInteraction000426780
      WBInteraction000426921
      WBInteraction000428078
      WBInteraction000432356
      WBInteraction000432357
      WBInteraction000436818
      WBInteraction000440214
      WBInteraction000441341
      WBInteraction000441732
      WBInteraction000441860
      WBInteraction000445234
      WBInteraction000445850
      WBInteraction000446854
      WBInteraction000447288
      WBInteraction000447609
      WBInteraction000457338
      WBInteraction000463349
      WBInteraction000464466
      WBInteraction000465217
      WBInteraction000465261
      WBInteraction000466385
      WBInteraction000469410
      WBInteraction000470571
      WBInteraction000471502
      WBInteraction000472740
      WBInteraction000472741
      WBInteraction000472752
      WBInteraction000474645
      WBInteraction000502471
      WBInteraction000519532
      WBInteraction000519541
      WBInteraction000519591
      WBInteraction000519592
      WBInteraction000519597
      WBInteraction000519600
      WBInteraction000519601
      WBInteraction000519603
      WBInteraction000519605
      WBInteraction000519607
      WBInteraction000519609
      WBInteraction000519611
      WBInteraction000519612
      WBInteraction000522675
      WBInteraction000522676
      WBInteraction000522677
      WBInteraction000522678
      WBInteraction000522679
      WBInteraction000522680
      WBInteraction000522681
      WBInteraction000522682
      WBInteraction000522683
      WBInteraction000522684
      WBInteraction000523223
      WBInteraction000523224
      WBInteraction000523225
      WBInteraction000523226
      WBInteraction000523227
      WBInteraction000523228
      WBInteraction000523229
      WBInteraction000523323
      WBInteraction000536880
      WBInteraction000536934
      WBInteraction000536967
      WBInteraction000536985
      WBInteraction000537039
      WBInteraction000539614
      WBInteraction000542056
      WBInteraction000542081
      WBInteraction000542123
      WBInteraction000542540
      WBInteraction000547450
      WBInteraction000547451
      WBInteraction000547452
      WBInteraction000547453
      WBInteraction000547454
      WBInteraction000549655
      WBInteraction000550099
      WBInteraction000551029
      WBInteraction000551030
      WBInteraction000551031
      WBInteraction000551032
      WBInteraction000551033
      WBInteraction000551034
      WBInteraction000551035
      WBInteraction000551036
      WBInteraction000551037
      WBInteraction000551038
      WBInteraction000551039
      WBInteraction000551040
      WBInteraction000551041
      WBInteraction000551042
      WBInteraction000551043
      WBInteraction000551044
      WBInteraction000551045
      WBInteraction000551046
      WBInteraction000551047
      WBInteraction000551048
      WBInteraction000551049
      WBInteraction000551050
      WBInteraction000551051
      WBInteraction000551052
      WBInteraction000551053
      WBInteraction000551054
      WBInteraction000551055
      WBInteraction000551056
      WBInteraction000551057
      WBInteraction000551058
      WBInteraction000551059
      WBInteraction000551060
      WBInteraction000551061
      WBInteraction000551102
      WBInteraction000553007
      WBInteraction000555557
      WBInteraction000555634
      WBInteraction000558974
      WBInteraction000559114
      WBInteraction000560450
      WBInteraction000561464
      WBInteraction000562196
      WBInteraction000565760
      WBInteraction000572671
      WBInteraction000573492
      WBInteraction000577429
      WBInteraction000577663
      WBInteraction000579430
      WBInteraction000580220
      WBInteraction000582746
  Map_info: Map: I Position: 3.03696 Error: 0.000521
    Positive: Positive_clone: C36B1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene