WormBase Tree Display for Gene: WBGene00003903
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WBGene00003903 | SMap | S_parent | Sequence | F18H3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pab-2 | Person_evidence | WBPerson1160 | |||||
Sequence_name | F18H3.3 | ||||||||
Molecular_name | F18H3.3a | ||||||||
F18H3.3a.1 | |||||||||
CE02193 | |||||||||
F18H3.3b | |||||||||
CE46847 | |||||||||
F18H3.3a.2 | |||||||||
F18H3.3a.3 | |||||||||
F18H3.3b.1 | |||||||||
Other_name | CELE_F18H3.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | pab-2 | ||||||||
DB_info | Database | AceView | gene | XO142 | |||||
WormQTL | gene | WBGene00003903 | |||||||
WormFlux | gene | WBGene00003903 | |||||||
NDB | locus_tag | CELE_F18H3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003903|UniProtKB=Q19579 | |||||||
family | PTHR24012 | ||||||||
NCBI | gene | 181473 | |||||||
RefSeq | protein | NM_001392874.1 | |||||||
NM_001392873.1 | |||||||||
TREEFAM | TREEFAM_ID | TF300458 | |||||||
TrEMBL | UniProtAcc | Q19581 | |||||||
Q19579 | |||||||||
UniProt_GCRP | UniProtAcc | Q19579 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pab | ||||||||
Allele (104) | |||||||||
Strain | WBStrain00032237 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Ortholog (46) | |||||||||
Paralog (15) | |||||||||
Structured_description | Concise_description | pab-2 encodes a polyadenylate-binding protein 1 homolog with high similarity to human PABP 1. | Curator_confirmed | WBPerson48 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Part of polysome. Is an ortholog of human PABPC1 (poly(A) binding protein cytoplasmic 1) and PABPC3 (poly(A) binding protein cytoplasmic 3). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F18H3.3a | |||||||
F18H3.3b | |||||||||
Corresponding_CDS_history | F18H3.3b:wp229 | ||||||||
Corresponding_transcript | F18H3.3a.1 | ||||||||
F18H3.3a.2 | |||||||||
F18H3.3a.3 | |||||||||
F18H3.3b.1 | |||||||||
Other_sequence (129) | |||||||||
Associated_feature (21) | |||||||||
Experimental_info | RNAi_result | WBRNAi00114631 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044973 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075241 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086419 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086420 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013529 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075240 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027893 | ||||||||
Expr1031840 | |||||||||
Expr1148943 | |||||||||
Expr2014675 | |||||||||
Expr2032908 | |||||||||
Drives_construct | WBCnstr00035806 | ||||||||
Construct_product | WBCnstr00035806 | ||||||||
Antibody | WBAntibody00002549 | ||||||||
WBAntibody00002700 | |||||||||
WBAntibody00002921 | |||||||||
Microarray_results (38) | |||||||||
Expression_cluster (264) | |||||||||
Interaction (259) | |||||||||
Map_info | Map | X | Position | 12.6882 | Error | 0.004601 | |||
Positive | Positive_clone | F18H3 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |