WormBase Tree Display for Gene: WBGene00003903
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| WBGene00003903 | SMap | S_parent | Sequence | F18H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pab-2 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | F18H3.3 | ||||||||
| Molecular_name | F18H3.3a | ||||||||
| F18H3.3a.1 | |||||||||
| CE02193 | |||||||||
| F18H3.3b | |||||||||
| CE46847 | |||||||||
| F18H3.3a.2 | |||||||||
| F18H3.3a.3 | |||||||||
| F18H3.3b.1 | |||||||||
| Other_name | CELE_F18H3.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pab-2 | ||||||||
| DB_info | Database | AceView | gene | XO142 | |||||
| WormQTL | gene | WBGene00003903 | |||||||
| WormFlux | gene | WBGene00003903 | |||||||
| NDB | locus_tag | CELE_F18H3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003903|UniProtKB=Q19579 | |||||||
| family | PTHR24012 | ||||||||
| NCBI | gene | 181473 | |||||||
| RefSeq | protein | NM_001392874.1 | |||||||
| NM_001392873.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF300458 | |||||||
| TrEMBL | UniProtAcc | Q19581 | |||||||
| Q19579 | |||||||||
| UniProt_GCRP | UniProtAcc | Q19579 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pab | ||||||||
| Allele | WBVar01499887 | ||||||||
| WBVar01499519 | |||||||||
| WBVar01499888 | |||||||||
| WBVar01499710 | |||||||||
| WBVar01703703 | |||||||||
| WBVar00093048 | |||||||||
| WBVar01527805 | |||||||||
| WBVar01679166 | |||||||||
| WBVar01527806 | |||||||||
| WBVar01527807 | |||||||||
| WBVar01527808 | |||||||||
| WBVar01527809 | |||||||||
| WBVar01527810 | |||||||||
| WBVar01527811 | |||||||||
| WBVar01527812 | |||||||||
| WBVar02146689 | |||||||||
| WBVar02013735 | |||||||||
| WBVar01487977 | |||||||||
| WBVar01487978 | |||||||||
| WBVar01572573 | |||||||||
| WBVar01759958 | |||||||||
| WBVar02140401 | |||||||||
| WBVar02011653 | |||||||||
| WBVar01497564 | |||||||||
| WBVar02034876 | |||||||||
| WBVar02034877 | |||||||||
| WBVar02011224 | |||||||||
| WBVar00216966 | |||||||||
| WBVar00216967 | |||||||||
| WBVar01493193 | |||||||||
| WBVar02005359 | |||||||||
| WBVar01202026 | |||||||||
| WBVar01202027 | |||||||||
| WBVar01202028 | |||||||||
| WBVar01202029 | |||||||||
| WBVar01202030 | |||||||||
| WBVar01928389 | |||||||||
| WBVar01928390 | |||||||||
| WBVar01202031 | |||||||||
| WBVar01202032 | |||||||||
| WBVar01202033 | |||||||||
| WBVar01202034 | |||||||||
| WBVar01202035 | |||||||||
| WBVar01202036 | |||||||||
| WBVar01202037 | |||||||||
| WBVar02027569 | |||||||||
| WBVar01202038 | |||||||||
| WBVar01202039 | |||||||||
| WBVar01787579 | |||||||||
| WBVar01202040 | |||||||||
| WBVar01787580 | |||||||||
| WBVar01202041 | |||||||||
| WBVar01787581 | |||||||||
| WBVar01202042 | |||||||||
| WBVar01787582 | |||||||||
| WBVar01202043 | |||||||||
| WBVar01787583 | |||||||||
| WBVar01202044 | |||||||||
| WBVar01787584 | |||||||||
| WBVar01787585 | |||||||||
| WBVar01202045 | |||||||||
| WBVar01787586 | |||||||||
| WBVar01202046 | |||||||||
| WBVar01787587 | |||||||||
| WBVar01202047 | |||||||||
| WBVar01787588 | |||||||||
| WBVar01202048 | |||||||||
| WBVar00084179 | |||||||||
| WBVar01202049 | |||||||||
| WBVar01202050 | |||||||||
| WBVar01202051 | |||||||||
| WBVar01202052 | |||||||||
| WBVar01202053 | |||||||||
| WBVar01202054 | |||||||||
| WBVar01202055 | |||||||||
| WBVar01202056 | |||||||||
| WBVar01202057 | |||||||||
| WBVar01202058 | |||||||||
| WBVar01202059 | |||||||||
| WBVar01202060 | |||||||||
| WBVar01202061 | |||||||||
| WBVar00522117 | |||||||||
| WBVar01202062 | |||||||||
| WBVar00522118 | |||||||||
| WBVar00522119 | |||||||||
| WBVar01202063 | |||||||||
| WBVar00522120 | |||||||||
| WBVar01202064 | |||||||||
| WBVar01202065 | |||||||||
| WBVar00522121 | |||||||||
| WBVar00522122 | |||||||||
| WBVar01202066 | |||||||||
| WBVar01202067 | |||||||||
| WBVar00522123 | |||||||||
| WBVar01202068 | |||||||||
| WBVar00522124 | |||||||||
| WBVar01202069 | |||||||||
| WBVar00522125 | |||||||||
| WBVar01202070 | |||||||||
| WBVar00522126 | |||||||||
| WBVar00522127 | |||||||||
| WBVar00522128 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| Strain | WBStrain00032237 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (46) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | pab-2 encodes a polyadenylate-binding protein 1 homolog with high similarity to human PABP 1. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Part of polysome. Is an ortholog of human PABPC1 (poly(A) binding protein cytoplasmic 1) and PABPC3 (poly(A) binding protein cytoplasmic 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F18H3.3a | |||||||
| F18H3.3b | |||||||||
| Corresponding_CDS_history | F18H3.3b:wp229 | ||||||||
| Corresponding_transcript | F18H3.3a.1 | ||||||||
| F18H3.3a.2 | |||||||||
| F18H3.3a.3 | |||||||||
| F18H3.3b.1 | |||||||||
| Other_sequence (129) | |||||||||
| Associated_feature (21) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00114631 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044973 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075241 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086419 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086420 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013529 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075240 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027893 | ||||||||
| Expr1031840 | |||||||||
| Expr1148943 | |||||||||
| Expr2014675 | |||||||||
| Expr2032908 | |||||||||
| Drives_construct | WBCnstr00035806 | ||||||||
| Construct_product | WBCnstr00035806 | ||||||||
| Antibody | WBAntibody00002549 | ||||||||
| WBAntibody00002700 | |||||||||
| WBAntibody00002921 | |||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (264) | |||||||||
| Interaction (259) | |||||||||
| Map_info | Map | X | Position | 12.6882 | Error | 0.004601 | |||
| Positive | Positive_clone | F18H3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
