WormBase Tree Display for Gene: WBGene00003902
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| WBGene00003902 | SMap | S_parent | Sequence | Y106G6H | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | pab | ||||||
| Allele (47) | |||||||
| Strain | WBStrain00036402 | ||||||
| WBStrain00007709 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (39) | |||||||
| Ortholog (59) | |||||||
| Paralog (15) | |||||||
| Structured_description | Concise_description | pab-1 encodes a polyadenylate-binding protein (i.e., poly(A)-binding protein, or PAB); pab-1 is essential for germline proliferation, regulation of adult lifespan, and normal body size; PAB-1 forms a complex with ATX-2, the C. elegans ataxin 2 ortholog, which is also required for germline development; PAB-1 has been successfully used as an epitope-tagged transgenic reagent for tissue-specific isolation of mRNAs. | Paper_evidence | WBPaper00005068 | |||
| WBPaper00005428 | |||||||
| WBPaper00012788 | |||||||
| WBPaper00012830 | |||||||
| WBPaper00012882 | |||||||
| WBPaper00012897 | |||||||
| WBPaper00013003 | |||||||
| WBPaper00024364 | |||||||
| WBPaper00024924 | |||||||
| Curator_confirmed | WBPerson1843 | ||||||
| WBPerson567 | |||||||
| Date_last_updated | 07 Jul 2008 00:00:00 | ||||||
| Automated_description | Enables mRNA binding activity. Involved in several processes, including gamete generation; positive regulation of reproductive process; and regulation of cell cycle. Located in P granule and P-body. Part of polysome. Expressed in intestine. Is an ortholog of several human genes including PABPC1 (poly(A) binding protein cytoplasmic 1); PABPC3 (poly(A) binding protein cytoplasmic 3); and PABPC4 (poly(A) binding protein cytoplasmic 4). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | Y106G6H.2 | |||||
| Corresponding_CDS_history | Y106G6H.2b:wp274 | ||||||
| Y106G6H.2c:wp274 | |||||||
| Corresponding_transcript | Y106G6H.2.1 | ||||||
| Y106G6H.2.2 | |||||||
| Y106G6H.2.3 | |||||||
| Other_sequence (258) | |||||||
| Associated_feature (13) | |||||||
| Experimental_info | RNAi_result (45) | ||||||
| Expr_pattern | Expr8554 | ||||||
| Expr13363 | |||||||
| Expr1022819 | |||||||
| Expr1031839 | |||||||
| Expr1158811 | |||||||
| Expr2014674 | |||||||
| Expr2032907 | |||||||
| Drives_construct | WBCnstr00035807 | ||||||
| Construct_product (13) | |||||||
| Antibody | WBAntibody00002359 | ||||||
| WBAntibody00002494 | |||||||
| WBAntibody00002700 | |||||||
| WBAntibody00002921 | |||||||
| Microarray_results (47) | |||||||
| Expression_cluster (180) | |||||||
| Interaction (595) | |||||||
| Map_info | Map | I | Position | 5.02503 | Error | 0.008962 | |
| Positive | Positive_clone | Y106G6H | Inferred_automatically | From CDS info | |||
| From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 5441 | |||||
| 5711 | |||||||
| Reference (46) | |||||||
| Method | Gene |
