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WormBase Tree Display for Gene: WBGene00003902

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Name Class

WBGene00003902SMapS_parentSequenceY106G6H
IdentityVersion1
NameCGC_namepab-1Person_evidenceWBPerson1160
Sequence_nameY106G6H.2
Molecular_nameY106G6H.2
Y106G6H.2.1
CE20412
Y106G6H.2.2
Y106G6H.2.3
Other_nameCELE_Y106G6H.2Accession_evidenceNDBBX284601
Public_namepab-1
DB_infoDatabaseAceViewgene1L10
WormQTLgeneWBGene00003902
WormFluxgeneWBGene00003902
NDBlocus_tagCELE_Y106G6H.2
PanthergeneCAEEL|WormBase=WBGene00003902|UniProtKB=Q9U302
familyPTHR24012
NCBIgene172920
RefSeqproteinNM_001383718.2
TrEMBLUniProtAccQ9U302
UniProt_GCRPUniProtAccQ9U302
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpab
Allele (47)
StrainWBStrain00036402
WBStrain00007709
RNASeq_FPKM (74)
GO_annotation (39)
Ortholog (59)
Paralog (15)
Structured_descriptionConcise_descriptionpab-1 encodes a polyadenylate-binding protein (i.e., poly(A)-binding protein, or PAB); pab-1 is essential for germline proliferation, regulation of adult lifespan, and normal body size; PAB-1 forms a complex with ATX-2, the C. elegans ataxin 2 ortholog, which is also required for germline development; PAB-1 has been successfully used as an epitope-tagged transgenic reagent for tissue-specific isolation of mRNAs.Paper_evidenceWBPaper00005068
WBPaper00005428
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
WBPaper00024364
WBPaper00024924
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated07 Jul 2008 00:00:00
Automated_descriptionEnables mRNA binding activity. Involved in several processes, including gamete generation; positive regulation of reproductive process; and regulation of cell cycle. Located in P granule and P-body. Part of polysome. Expressed in intestine. Is an ortholog of several human genes including PABPC1 (poly(A) binding protein cytoplasmic 1); PABPC3 (poly(A) binding protein cytoplasmic 3); and PABPC4 (poly(A) binding protein cytoplasmic 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY106G6H.2
Corresponding_CDS_historyY106G6H.2b:wp274
Y106G6H.2c:wp274
Corresponding_transcriptY106G6H.2.1
Y106G6H.2.2
Y106G6H.2.3
Other_sequence (258)
Associated_feature (13)
Experimental_infoRNAi_result (45)
Expr_patternExpr8554
Expr13363
Expr1022819
Expr1031839
Expr1158811
Expr2014674
Expr2032907
Drives_constructWBCnstr00035807
Construct_product (13)
AntibodyWBAntibody00002359
WBAntibody00002494
WBAntibody00002700
WBAntibody00002921
Microarray_results (47)
Expression_cluster (180)
InteractionWBInteraction000033022
WBInteraction000033996
WBInteraction000033997
WBInteraction000034095
WBInteraction000034996
WBInteraction000035514
WBInteraction000035618
WBInteraction000035624
WBInteraction000036011
WBInteraction000036262
WBInteraction000036504
WBInteraction000036787
WBInteraction000036788
WBInteraction000037283
WBInteraction000037635
WBInteraction000037692
WBInteraction000037867
WBInteraction000038020
WBInteraction000038429
WBInteraction000038430
WBInteraction000038993
WBInteraction000040071
WBInteraction000040307
WBInteraction000040429
WBInteraction000040474
WBInteraction000040629
WBInteraction000041220
WBInteraction000041763
WBInteraction000041764
WBInteraction000042565
WBInteraction000042865
WBInteraction000044274
WBInteraction000044453
WBInteraction000045007
WBInteraction000045008
WBInteraction000045009
WBInteraction000045010
WBInteraction000045116
WBInteraction000045403
WBInteraction000045405
WBInteraction000045523
WBInteraction000045524
WBInteraction000046608
WBInteraction000046823
WBInteraction000047001
WBInteraction000047082
WBInteraction000047585
WBInteraction000048067
WBInteraction000050369
WBInteraction000103148
WBInteraction000103583
WBInteraction000103907
WBInteraction000104314
WBInteraction000104649
WBInteraction000104860
WBInteraction000104985
WBInteraction000108703
WBInteraction000109038
WBInteraction000109153
WBInteraction000109179
WBInteraction000110506
WBInteraction000110574
WBInteraction000110908
WBInteraction000111884
WBInteraction000112364
WBInteraction000112562
WBInteraction000112671
WBInteraction000112745
WBInteraction000112870
WBInteraction000114574
WBInteraction000114974
WBInteraction000115389
WBInteraction000117553
WBInteraction000117671
WBInteraction000118218
WBInteraction000118947
WBInteraction000119030
WBInteraction000119132
WBInteraction000120219
WBInteraction000120335
WBInteraction000120483
WBInteraction000120989
WBInteraction000121656
WBInteraction000121702
WBInteraction000122446
WBInteraction000124059
WBInteraction000125321
WBInteraction000135013
WBInteraction000135015
WBInteraction000135016
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WBInteraction000135081
WBInteraction000135082
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WBInteraction000135084
WBInteraction000135085
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WBInteraction000135091
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WBInteraction000160200
WBInteraction000160201
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WBInteraction000160203
WBInteraction000160204
WBInteraction000160205
WBInteraction000160206
WBInteraction000160554
WBInteraction000161702
WBInteraction000164107
WBInteraction000164207
WBInteraction000164913
WBInteraction000165384
WBInteraction000165385
WBInteraction000166758
WBInteraction000167754
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WBInteraction000179212
WBInteraction000179776
WBInteraction000180673
WBInteraction000180674
WBInteraction000180675
WBInteraction000180676
WBInteraction000181053
WBInteraction000181541
WBInteraction000181947
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WBInteraction000182263
WBInteraction000183003
WBInteraction000183156
WBInteraction000185593
WBInteraction000185980
WBInteraction000186316
WBInteraction000187283
WBInteraction000187328
WBInteraction000188225
WBInteraction000189474
WBInteraction000190759
WBInteraction000190766
WBInteraction000191856
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WBInteraction000192555
WBInteraction000194372
WBInteraction000194630
WBInteraction000196440
WBInteraction000196912
WBInteraction000197953
WBInteraction000198216
WBInteraction000198416
WBInteraction000198425
WBInteraction000199136
WBInteraction000199527
WBInteraction000200063
WBInteraction000200552
WBInteraction000200965
WBInteraction000201078
WBInteraction000201283
WBInteraction000201284
WBInteraction000205504
WBInteraction000206200
WBInteraction000206366
WBInteraction000206983
WBInteraction000209311
WBInteraction000210342
WBInteraction000210453
WBInteraction000213096
WBInteraction000216151
WBInteraction000218060
WBInteraction000218745
WBInteraction000218807
WBInteraction000220229
WBInteraction000221165
WBInteraction000221256
WBInteraction000221865
WBInteraction000224101
WBInteraction000224589
WBInteraction000228583
WBInteraction000228833
WBInteraction000229922
WBInteraction000229923
WBInteraction000231273
WBInteraction000232080
WBInteraction000232705
WBInteraction000233930
WBInteraction000234179
WBInteraction000235151
WBInteraction000235522
WBInteraction000235535
WBInteraction000237903
WBInteraction000237992
WBInteraction000238521
WBInteraction000238632
WBInteraction000239766
WBInteraction000240486
WBInteraction000241889
WBInteraction000242144
WBInteraction000242166
WBInteraction000242348
WBInteraction000243552
WBInteraction000243553
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WBInteraction000243555
WBInteraction000243556
WBInteraction000243560
WBInteraction000243567
WBInteraction000243784
WBInteraction000243786
WBInteraction000243789
WBInteraction000243870
WBInteraction000243891
WBInteraction000243917
WBInteraction000243947
WBInteraction000243958
WBInteraction000243962
WBInteraction000243973
WBInteraction000244047
WBInteraction000244060
WBInteraction000244076
WBInteraction000244079
WBInteraction000245998
WBInteraction000246047
WBInteraction000247842
WBInteraction000249465
WBInteraction000249818
WBInteraction000251523
WBInteraction000252655
WBInteraction000252657
WBInteraction000252735
WBInteraction000253133
WBInteraction000256261
WBInteraction000261542
WBInteraction000261543
WBInteraction000262778
WBInteraction000263696
WBInteraction000265195
WBInteraction000266613
WBInteraction000269737
WBInteraction000270003
WBInteraction000270721
WBInteraction000275823
WBInteraction000276524
WBInteraction000276782
WBInteraction000276878
WBInteraction000277979
WBInteraction000278265
WBInteraction000278687
WBInteraction000282151
WBInteraction000282306
WBInteraction000283817
WBInteraction000284756
WBInteraction000286111
WBInteraction000298286
WBInteraction000298927
WBInteraction000299962
WBInteraction000300132
WBInteraction000300133
WBInteraction000300713
WBInteraction000301470
WBInteraction000302441
WBInteraction000302448
WBInteraction000304257
WBInteraction000306907
WBInteraction000307768
WBInteraction000308333
WBInteraction000309204
WBInteraction000309800
WBInteraction000310648
WBInteraction000312628
WBInteraction000312775
WBInteraction000313682
WBInteraction000315905
WBInteraction000316777
WBInteraction000317175
WBInteraction000323283
WBInteraction000323691
WBInteraction000325820
WBInteraction000327788
WBInteraction000329475
WBInteraction000329697
WBInteraction000332758
WBInteraction000335916
WBInteraction000338937
WBInteraction000339077
WBInteraction000339686
WBInteraction000339745
WBInteraction000341818
WBInteraction000342809
WBInteraction000343081
WBInteraction000343231
WBInteraction000348212
WBInteraction000348375
WBInteraction000349908
WBInteraction000351130
WBInteraction000352089
WBInteraction000352313
WBInteraction000352391
WBInteraction000353497
WBInteraction000354739
WBInteraction000354829
WBInteraction000357737
WBInteraction000357738
WBInteraction000357739
WBInteraction000357740
WBInteraction000357741
WBInteraction000357742
WBInteraction000358579
WBInteraction000359668
WBInteraction000360479
WBInteraction000361178
WBInteraction000361782
WBInteraction000362138
WBInteraction000362610
WBInteraction000363648
WBInteraction000364070
WBInteraction000365364
WBInteraction000366149
WBInteraction000371682
WBInteraction000372779
WBInteraction000373122
WBInteraction000373710
WBInteraction000373711
WBInteraction000373712
WBInteraction000373713
WBInteraction000373714
WBInteraction000374537
WBInteraction000375374
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WBInteraction000376459
WBInteraction000378917
WBInteraction000379182
WBInteraction000380735
WBInteraction000383465
WBInteraction000387127
WBInteraction000388582
WBInteraction000388773
WBInteraction000394964
WBInteraction000395828
WBInteraction000397510
WBInteraction000398506
WBInteraction000398507
WBInteraction000398508
WBInteraction000398509
WBInteraction000401116
WBInteraction000401933
WBInteraction000404141
WBInteraction000404144
WBInteraction000404145
WBInteraction000404922
WBInteraction000405479
WBInteraction000412627
WBInteraction000418269
WBInteraction000419740
WBInteraction000424219
WBInteraction000425706
WBInteraction000430304
WBInteraction000430867
WBInteraction000432137
WBInteraction000432951
WBInteraction000434458
WBInteraction000434808
WBInteraction000434928
WBInteraction000435837
WBInteraction000436967
WBInteraction000437130
WBInteraction000439341
WBInteraction000439621
WBInteraction000440163
WBInteraction000441739
WBInteraction000442300
WBInteraction000442337
WBInteraction000442561
WBInteraction000446445
WBInteraction000448426
WBInteraction000449123
WBInteraction000450637
WBInteraction000451902
WBInteraction000453227
WBInteraction000454830
WBInteraction000455852
WBInteraction000457982
WBInteraction000461654
WBInteraction000462453
WBInteraction000462756
WBInteraction000463105
WBInteraction000463112
WBInteraction000463727
WBInteraction000463761
WBInteraction000463789
WBInteraction000463916
WBInteraction000464279
WBInteraction000465072
WBInteraction000465073
WBInteraction000466137
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WBInteraction000466968
WBInteraction000467032
WBInteraction000467267
WBInteraction000467280
WBInteraction000467380
WBInteraction000467496
WBInteraction000467629
WBInteraction000468111
WBInteraction000468596
WBInteraction000468748
WBInteraction000468887
WBInteraction000469028
WBInteraction000469307
WBInteraction000469412
WBInteraction000469570
WBInteraction000470014
WBInteraction000470015
WBInteraction000470249
WBInteraction000470294
WBInteraction000470353
WBInteraction000470355
WBInteraction000470419
WBInteraction000470543
WBInteraction000470752
WBInteraction000470874
WBInteraction000471196
WBInteraction000471354
WBInteraction000471355
WBInteraction000471398
WBInteraction000471468
WBInteraction000471636
WBInteraction000471736
WBInteraction000472034
WBInteraction000472366
WBInteraction000473088
WBInteraction000473177
WBInteraction000474140
WBInteraction000474606
WBInteraction000474807
WBInteraction000474808
WBInteraction000474914
WBInteraction000474920
WBInteraction000475012
WBInteraction000475109
WBInteraction000500772
WBInteraction000517429
WBInteraction000520959
WBInteraction000520960
WBInteraction000520961
WBInteraction000520962
WBInteraction000521379
WBInteraction000522303
WBInteraction000522443
WBInteraction000522914
WBInteraction000538891
WBInteraction000539523
WBInteraction000539586
WBInteraction000539874
WBInteraction000540353
WBInteraction000546364
WBInteraction000546748
WBInteraction000549687
WBInteraction000551028
WBInteraction000551314
WBInteraction000552276
WBInteraction000552517
WBInteraction000553351
WBInteraction000553531
WBInteraction000553769
WBInteraction000554578
WBInteraction000554720
WBInteraction000554760
WBInteraction000555075
WBInteraction000555374
WBInteraction000556237
WBInteraction000556782
WBInteraction000559939
WBInteraction000560706
WBInteraction000561754
WBInteraction000562174
WBInteraction000562371
WBInteraction000562774
WBInteraction000564115
WBInteraction000564470
WBInteraction000564664
WBInteraction000565428
WBInteraction000565610
WBInteraction000565991
WBInteraction000566259
WBInteraction000566538
WBInteraction000567233
WBInteraction000567352
WBInteraction000569364
WBInteraction000569632
WBInteraction000569809
WBInteraction000569810
WBInteraction000570083
WBInteraction000572013
WBInteraction000572642
WBInteraction000572792
WBInteraction000574028
WBInteraction000575753
WBInteraction000576064
WBInteraction000577658
WBInteraction000578315
WBInteraction000580214
WBInteraction000582825
WBInteraction000584523
WBInteraction000584538
WBInteraction000584569
WBInteraction000585222
Map_infoMapIPosition5.02503Error0.008962
PositivePositive_cloneY106G6HInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5441
5711
Reference (46)
MethodGene