WormBase Tree Display for Gene: WBGene00003882
expand all nodes | collapse all nodes | view schema
| WBGene00003882 | SMap | S_parent | Sequence | F59E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | orc-2 | |||||||
| Sequence_name | F59E10.1 | ||||||||
| Molecular_name | F59E10.1 | ||||||||
| F59E10.1.1 | |||||||||
| CE11492 | |||||||||
| Other_name | ceOrc2 | Accession_evidence | EMBL | U40270 | |||||
| CELE_F59E10.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | orc-2 | ||||||||
| DB_info | Database | AceView | gene | 2L167 | |||||
| WormQTL | gene | WBGene00003882 | |||||||
| WormFlux | gene | WBGene00003882 | |||||||
| NDB | locus_tag | CELE_F59E10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003882|UniProtKB=Q21037 | |||||||
| family | PTHR14052 | ||||||||
| NCBI | gene | 174676 | |||||||
| RefSeq | protein | NM_063938.6 | |||||||
| SwissProt | UniProtAcc | Q21037 | |||||||
| TREEFAM | TREEFAM_ID | TF101092 | |||||||
| UniProt_GCRP | UniProtAcc | Q21037 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | orc | ||||||||
| Allele (66) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070081 | ||||||||
| 00070082 | |||||||||
| 00070083 | |||||||||
| 00070084 | |||||||||
| 00070085 | |||||||||
| 00070086 | |||||||||
| 00111953 | |||||||||
| 00111954 | |||||||||
| 00111955 | |||||||||
| Contained_in_operon | CEOP2508 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Concise_description | orc-2 encodes the C. elegans ortholog of the Orc2 subunit of the origin recognition complex (ORC); by homology, ORC-2 is predicted to function as part of a multi-protein scaffolding complex that regulates initiation of DNA replication; consistent with its predicted role, orc-2 activity is required for proper execution of a number of biological processes including germ cell proliferation and reproduction, embryonic development, vulval development, and locomotion. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00006395 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00025147 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Apr 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA replication origin binding activity. Predicted to be involved in DNA replication. Located in nuclear chromosome. Is an ortholog of human ORC2 (origin recognition complex subunit 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F59E10.1 | |||||||
| Corresponding_transcript | F59E10.1.1 | ||||||||
| Other_sequence | U40270 | ||||||||
| CBC08184_1 | |||||||||
| CV199877.1 | |||||||||
| CRC07445_1 | |||||||||
| Tcir_isotig04728 | |||||||||
| CJC15679_1 | |||||||||
| CR02951 | |||||||||
| Tcir_isotig04729 | |||||||||
| Associated_feature | WBsf658183 | ||||||||
| WBsf989514 | |||||||||
| WBsf989515 | |||||||||
| WBsf1013111 | |||||||||
| WBsf222079 | |||||||||
| WBsf222080 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr9924 | ||||||||
| Expr1019609 | |||||||||
| Expr1031826 | |||||||||
| Expr1152929 | |||||||||
| Expr2014634 | |||||||||
| Expr2032867 | |||||||||
| Drives_construct | WBCnstr00035816 | ||||||||
| Construct_product | WBCnstr00009674 | ||||||||
| WBCnstr00035816 | |||||||||
| Antibody | WBAntibody00002180 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (197) | |||||||||
| Map_info | Map | II | Position | 3.13081 | Error | 0.000102 | |||
| Positive | Positive_clone | F59E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00017807 | ||||||||
| WBPaper00025073 | |||||||||
| WBPaper00031224 | |||||||||
| WBPaper00036179 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040279 | |||||||||
| WBPaper00052102 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
